Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Clp1Q99LI9 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.4□□□□□ -1.55
Clp1Q99LI9 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.4□□□□□ -1.55
Clp1Q99LI9 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
Clp1Q99LI9 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Clp1Q99LI9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC5.4□□□□□ -1.55
Clp1Q99LI9 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.4□□□□□ -1.55
Clp1Q99LI9 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Clp1Q99LI9 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Clp1Q99LI9 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm22488-201ENSMUST00000116811 127 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm14657-201ENSMUST00000117461 302 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm9850-201ENSMUST00000117916 227 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm15381-201ENSMUST00000121501 1156 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm12110-201ENSMUST00000121601 579 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm16358-201ENSMUST00000146046 210 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm23906-201ENSMUST00000157573 128 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm24504-201ENSMUST00000157679 100 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Mir5098-201ENSMUST00000175320 82 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm28097-201ENSMUST00000187333 366 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm37670-201ENSMUST00000193622 229 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm44274-201ENSMUST00000203417 256 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm45101-201ENSMUST00000208327 232 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm45236-201ENSMUST00000208632 229 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 AC172751.1-201ENSMUST00000226887 440 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm6065-201ENSMUST00000081336 492 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm26446-201ENSMUST00000082455 103 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Smc5-206ENSMUST00000226111 3265 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.39□□□□□ -1.55
Clp1Q99LI9 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Clp1Q99LI9 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm15807-201ENSMUST00000119880 1128 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm12924-201ENSMUST00000121747 318 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm22718-201ENSMUST00000122701 315 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm26102-201ENSMUST00000157251 284 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm22789-201ENSMUST00000157884 130 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm22160-201ENSMUST00000158405 328 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm23023-201ENSMUST00000158767 109 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm2389-201ENSMUST00000160487 189 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm5372-201ENSMUST00000187540 409 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm36891-201ENSMUST00000191995 655 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm32340-201ENSMUST00000192883 259 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm37586-201ENSMUST00000193654 204 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm9442-201ENSMUST00000194242 319 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm45704-201ENSMUST00000212582 403 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 Gm29818-201ENSMUST00000218070 165 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.38□□□□□ -1.55
Clp1Q99LI9 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms