Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37661-201ENSMUST00000191863 1550 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm11878-201ENSMUST00000117908 400 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm11633-201ENSMUST00000118176 444 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm15195-201ENSMUST00000118775 263 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm11843-201ENSMUST00000118984 425 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm14570-201ENSMUST00000119444 391 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm14303-201ENSMUST00000121320 171 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm14366-201ENSMUST00000121970 730 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm13745-201ENSMUST00000121994 527 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm8200-201ENSMUST00000122390 222 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm23583-201ENSMUST00000158533 289 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm17194-201ENSMUST00000164610 348 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm13144-201ENSMUST00000179385 345 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm27308-201ENSMUST00000184807 233 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm6947-201ENSMUST00000186254 78 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm18505-201ENSMUST00000187360 790 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm28700-201ENSMUST00000187614 579 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm29523-201ENSMUST00000191415 699 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm9245-201ENSMUST00000200528 983 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm45778-201ENSMUST00000211959 153 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm46998-201ENSMUST00000221444 330 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 AC165146.1-201ENSMUST00000223777 900 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Rny3-201ENSMUST00000083011 102 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm26064-201ENSMUST00000083381 109 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.67□□□□□ -1.66
Ccdc9Q8VC31 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Mir190b-201ENSMUST00000104803 80 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm16362-201ENSMUST00000135189 214 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm7855-201ENSMUST00000137737 687 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm25665-201ENSMUST00000157695 110 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm23379-201ENSMUST00000180026 107 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm43096-201ENSMUST00000196173 421 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm43493-201ENSMUST00000199837 202 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm43505-201ENSMUST00000200579 139 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm44449-201ENSMUST00000203610 153 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm33626-201ENSMUST00000206790 828 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm46369-201ENSMUST00000221577 401 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm2544-201ENSMUST00000222702 756 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm25005-201ENSMUST00000083812 156 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc9Q8VC31 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ccdc9Q8VC31 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ccdc9Q8VC31 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ccdc9Q8VC31 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms