Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Svet1-201ENSMUST00000209370 3940 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Mir551b-201ENSMUST00000102165 98 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm2005-201ENSMUST00000120759 542 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm12900-201ENSMUST00000120919 573 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm12087-201ENSMUST00000121878 258 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm13092-201ENSMUST00000136346 260 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm23960-201ENSMUST00000157206 131 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm14527-201ENSMUST00000179300 639 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm27676-201ENSMUST00000183669 61 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm37111-201ENSMUST00000193250 634 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm37869-201ENSMUST00000193385 595 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm38329-201ENSMUST00000193473 427 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm37353-201ENSMUST00000194497 313 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm44376-201ENSMUST00000197570 128 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm44611-201ENSMUST00000207507 355 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm20304-201ENSMUST00000218168 444 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm7540-201ENSMUST00000219764 926 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm26165-201ENSMUST00000083791 138 ntBASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 AC163660.3-201ENSMUST00000224253 1563 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm24403-201ENSMUST00000104616 130 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm11874-201ENSMUST00000117437 130 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm14926-201ENSMUST00000120650 508 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm11829-201ENSMUST00000121003 282 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm22816-201ENSMUST00000157450 117 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm24675-201ENSMUST00000158757 259 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm20415-201ENSMUST00000172877 423 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm22859-201ENSMUST00000174978 122 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm43043-201ENSMUST00000196579 412 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm43505-201ENSMUST00000200579 139 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm44726-201ENSMUST00000203427 217 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm44765-201ENSMUST00000206927 601 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm7624-201ENSMUST00000209702 435 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm25578-201ENSMUST00000083406 104 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Gm16261-201ENSMUST00000096813 205 ntBASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ushbp1Q8R370 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms