Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm36259-201ENSMUST00000197340 392 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm7468-201ENSMUST00000203900 652 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm8132-201ENSMUST00000204938 640 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm44583-201ENSMUST00000207478 281 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm18672-201ENSMUST00000208035 270 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm7381-201ENSMUST00000098958 300 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm24281-201ENSMUST00000104234 136 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm13349-201ENSMUST00000118436 411 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm14793-201ENSMUST00000118739 311 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm24898-201ENSMUST00000158133 106 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm18522-201ENSMUST00000173947 650 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm23215-201ENSMUST00000178153 121 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm8807-201ENSMUST00000179328 492 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm5527-201ENSMUST00000179821 642 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm28661-201ENSMUST00000188231 681 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm29389-201ENSMUST00000191562 352 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm4248-201ENSMUST00000196905 316 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm43853-201ENSMUST00000197162 301 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm30155-201ENSMUST00000223458 339 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.73□□□□□ -1.65
Vps53Q8CCB4 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm23319-201ENSMUST00000104467 131 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm11352-201ENSMUST00000119264 517 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm11512-201ENSMUST00000119669 663 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm14785-201ENSMUST00000120185 539 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm11438-201ENSMUST00000121582 189 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm24998-201ENSMUST00000157908 89 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm22314-201ENSMUST00000158007 281 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm26036-201ENSMUST00000158149 144 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm2389-201ENSMUST00000160487 189 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm25873-201ENSMUST00000180317 107 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Mir6341-201ENSMUST00000183490 121 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Mir6345-201ENSMUST00000184286 128 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Mir496b-201ENSMUST00000184935 113 ntBASIC4.72□□□□□ -1.65
Vps53Q8CCB4 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms