Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Mir27a-201ENSMUST00000083510 87 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm26376-201ENSMUST00000104784 110 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm23841-201ENSMUST00000116951 114 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm12647-201ENSMUST00000118977 265 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Zakit-201ENSMUST00000157677 308 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm23965-201ENSMUST00000157969 142 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm23546-201ENSMUST00000158211 137 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm26022-201ENSMUST00000158663 108 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm26318-201ENSMUST00000176507 96 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm27543-201ENSMUST00000183562 177 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm28976-201ENSMUST00000188070 144 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm4322-201ENSMUST00000191094 336 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm2059-201ENSMUST00000212025 287 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm18442-201ENSMUST00000220925 639 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm23972-201ENSMUST00000083322 165 ntBASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim47Q8C0E3 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm26300-201ENSMUST00000102282 94 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm14296-202ENSMUST00000108931 750 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm11550-201ENSMUST00000118210 699 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm12311-201ENSMUST00000118803 374 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm12486-201ENSMUST00000120887 541 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm27723-201ENSMUST00000157398 63 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm25666-201ENSMUST00000157702 107 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm23759-201ENSMUST00000158351 268 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm25051-201ENSMUST00000158602 249 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm16232-201ENSMUST00000162856 167 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm10292-202ENSMUST00000193165 585 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm10048-201ENSMUST00000194196 372 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Gm2645-201ENSMUST00000223516 547 ntBASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim47Q8C0E3 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
Trim47Q8C0E3 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms