Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm14987-201ENSMUST00000117820 676 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm22236-201ENSMUST00000157093 106 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm26349-201ENSMUST00000157530 130 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm24810-201ENSMUST00000175317 70 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm21726-201ENSMUST00000179654 392 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm37164-201ENSMUST00000192809 637 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm37416-201ENSMUST00000193596 318 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm42453-201ENSMUST00000200477 409 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm44583-201ENSMUST00000207478 281 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm45157-201ENSMUST00000208729 401 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm44853-201ENSMUST00000209070 250 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm17829-201ENSMUST00000219782 344 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.68□□□□□ -1.5
Usp40Q8BWR4 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Mir690-201ENSMUST00000102110 109 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm26396-201ENSMUST00000104093 132 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm11874-201ENSMUST00000117437 130 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm16431-201ENSMUST00000117454 431 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm11352-201ENSMUST00000119264 517 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm24901-201ENSMUST00000158125 110 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm16038-201ENSMUST00000159317 193 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm22857-201ENSMUST00000174969 134 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm26177-201ENSMUST00000178683 107 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm29231-201ENSMUST00000179850 319 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm29484-201ENSMUST00000186067 324 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm29045-201ENSMUST00000187278 698 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm37743-201ENSMUST00000194645 376 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm6510-201ENSMUST00000195916 574 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm4248-201ENSMUST00000196905 316 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm4644-201ENSMUST00000197587 400 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm43494-201ENSMUST00000197672 388 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm43440-201ENSMUST00000201957 729 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Mir34b-201ENSMUST00000083558 84 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Gm24764-201ENSMUST00000083686 199 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Olfr575-201ENSMUST00000084812 957 ntBASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Usp40Q8BWR4 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm4736-201ENSMUST00000100870 380 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm26075-201ENSMUST00000104062 121 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm13331-201ENSMUST00000117500 448 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm14901-201ENSMUST00000119001 283 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms