Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Trim56Q80VI1 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm15752-201ENSMUST00000117427 394 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm12806-201ENSMUST00000119384 268 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm15167-201ENSMUST00000121997 187 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm22073-201ENSMUST00000122668 189 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm25806-201ENSMUST00000122782 122 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm24059-201ENSMUST00000157493 312 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm23078-201ENSMUST00000157848 148 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm27568-201ENSMUST00000184220 99 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm17956-201ENSMUST00000199931 838 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm44261-201ENSMUST00000203337 209 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm44858-201ENSMUST00000207360 154 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Olfr895-201ENSMUST00000093864 951 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.45□□□□□ -1.54
Trim56Q80VI1 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Trim56Q80VI1 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm12683-201ENSMUST00000117528 415 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm11577-201ENSMUST00000118030 737 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm13510-201ENSMUST00000118659 429 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm9043-201ENSMUST00000119677 314 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm11584-201ENSMUST00000120636 325 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm6058-201ENSMUST00000154261 399 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm25278-201ENSMUST00000157267 120 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm26348-201ENSMUST00000157528 240 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm25666-201ENSMUST00000157702 107 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm24439-201ENSMUST00000157894 117 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm25156-201ENSMUST00000179809 79 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm26746-201ENSMUST00000181722 487 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Mir6413-201ENSMUST00000184049 108 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm37455-201ENSMUST00000191993 529 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm43440-201ENSMUST00000201957 729 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm44779-201ENSMUST00000206937 708 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm45387-201ENSMUST00000209792 632 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm45523-201ENSMUST00000210712 799 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm8249-201ENSMUST00000219225 465 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm6065-201ENSMUST00000081336 492 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim56Q80VI1 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim56Q80VI1 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm24120-201ENSMUST00000103978 129 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm9850-201ENSMUST00000117916 227 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm26347-201ENSMUST00000157526 131 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Gm26085-201ENSMUST00000157900 116 ntBASIC5.43□□□□□ -1.54
Trim56Q80VI1 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms