Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm23578-201ENSMUST00000103943 104 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm25418-201ENSMUST00000104214 129 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm13378-201ENSMUST00000117483 336 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm15211-201ENSMUST00000118932 528 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm12768-201ENSMUST00000120055 759 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm23169-201ENSMUST00000157157 112 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm5258-201ENSMUST00000165437 327 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm22290-201ENSMUST00000177655 107 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm22583-201ENSMUST00000178031 107 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm26983-201ENSMUST00000182051 388 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Mir7008-201ENSMUST00000184398 63 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm42672-201ENSMUST00000197821 352 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm31931-201ENSMUST00000219666 222 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm9269-201ENSMUST00000221661 578 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm46389-201ENSMUST00000223199 392 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm5215-201ENSMUST00000054380 405 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm23750-201ENSMUST00000104222 132 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm24889-201ENSMUST00000104388 132 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm26376-201ENSMUST00000104784 110 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm15994-201ENSMUST00000118029 402 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm14915-201ENSMUST00000120747 204 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm25106-201ENSMUST00000122672 134 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm26347-201ENSMUST00000157526 131 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm26373-201ENSMUST00000157833 103 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Mir1963-201ENSMUST00000158594 59 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm24636-201ENSMUST00000158673 288 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Mir7037-201ENSMUST00000184414 65 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm28654-201ENSMUST00000189801 379 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm34176-201ENSMUST00000192621 474 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm18964-201ENSMUST00000193013 563 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm43975-201ENSMUST00000203023 481 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm43945-201ENSMUST00000203595 754 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm44475-201ENSMUST00000204041 424 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm2522-201ENSMUST00000204280 322 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm17811-201ENSMUST00000206193 387 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm18854-201ENSMUST00000211196 329 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm5955-201ENSMUST00000222712 219 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm6065-201ENSMUST00000081336 492 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Snora52-201ENSMUST00000082732 137 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm23460-201ENSMUST00000083258 109 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.69□□□□□ -1.66
Scaf4Q6PFF0 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm12255-201ENSMUST00000117184 284 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm11229-201ENSMUST00000121993 437 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm26102-201ENSMUST00000157251 284 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm24439-201ENSMUST00000157894 117 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms