Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Tpm4Q6IRU2 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Tpm4Q6IRU2 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Tpm4Q6IRU2 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Mir294-201ENSMUST00000104710 84 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm14897-201ENSMUST00000118213 207 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm12042-201ENSMUST00000120479 301 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm14907-201ENSMUST00000121948 854 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm14162-201ENSMUST00000121985 601 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm23325-201ENSMUST00000157422 129 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm22330-201ENSMUST00000158068 115 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm18384-201ENSMUST00000195974 808 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Tpm4Q6IRU2 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm11488-201ENSMUST00000117277 863 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm11843-201ENSMUST00000118984 425 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Mir7028-201ENSMUST00000185016 64 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm19257-201ENSMUST00000186121 183 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm43932-201ENSMUST00000204499 52 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Gm45380-201ENSMUST00000210465 315 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Tpm4Q6IRU2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm26341-201ENSMUST00000104561 134 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm11905-201ENSMUST00000117653 678 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm8840-201ENSMUST00000122454 386 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm18727-201ENSMUST00000185981 553 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm38329-201ENSMUST00000193473 427 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm18327-201ENSMUST00000202426 830 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm43967-201ENSMUST00000203787 301 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm44594-201ENSMUST00000208982 407 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm17872-201ENSMUST00000222550 532 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.13□□□□□ -1.91
Tpm4Q6IRU2 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm11229-201ENSMUST00000121993 437 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm12755-201ENSMUST00000122297 282 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm26088-201ENSMUST00000157896 131 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm27608-201ENSMUST00000184822 162 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm32340-201ENSMUST00000192883 259 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm37007-201ENSMUST00000194234 319 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm18445-201ENSMUST00000195502 774 ntBASIC3.12□□□□□ -1.91
Tpm4Q6IRU2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms