Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Supt4b-201ENSMUST00000214434 351 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 CT030166.2-201ENSMUST00000222021 368 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm2645-201ENSMUST00000223516 547 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Mir338-201ENSMUST00000083666 98 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm24350-201ENSMUST00000104163 133 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm14774-201ENSMUST00000117857 536 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm15012-201ENSMUST00000119176 106 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm12820-201ENSMUST00000119233 342 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm12512-201ENSMUST00000119620 217 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm11742-201ENSMUST00000119903 233 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm5384-201ENSMUST00000120313 463 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm22538-201ENSMUST00000158169 299 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm23704-201ENSMUST00000158844 340 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm24819-201ENSMUST00000175094 166 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm20674-201ENSMUST00000177452 369 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm27490-201ENSMUST00000184754 128 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm9775-201ENSMUST00000189402 331 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm44776-201ENSMUST00000207212 381 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm17766-201ENSMUST00000209223 442 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm45313-201ENSMUST00000210584 178 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 AC165157.3-201ENSMUST00000220815 103 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm22740-201ENSMUST00000083439 109 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Gm23731-201ENSMUST00000083749 107 ntBASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Sh3rf1Q69ZI1 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm24578-201ENSMUST00000103970 129 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm24170-201ENSMUST00000104124 133 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Mir875-201ENSMUST00000104698 78 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm13046-201ENSMUST00000117391 501 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm12231-201ENSMUST00000119447 695 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm12042-201ENSMUST00000120479 301 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm11909-201ENSMUST00000121424 759 ntBASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.04□□□□□ -1.6
Sh3rf1Q69ZI1 Gm24965-201ENSMUST00000157922 106 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms