Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim28Q62318 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.12□□□□□ -1.59
Trim28Q62318 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim28Q62318 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Trim28Q62318 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Mir147-201ENSMUST00000102354 79 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm25876-201ENSMUST00000104329 119 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm10552-201ENSMUST00000113396 372 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm11386-201ENSMUST00000117761 347 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm15126-201ENSMUST00000118631 833 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm15364-201ENSMUST00000119618 585 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm14852-201ENSMUST00000120065 647 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm6591-201ENSMUST00000121063 434 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC5.11□□□□□ -1.59
Trim28Q62318 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim28Q62318 Cfap61-214ENSMUST00000167179 183 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.11□□□□□ -1.59
Trim28Q62318 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim28Q62318 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm29334-201ENSMUST00000190334 357 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Gm37313-201ENSMUST00000191673 290 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Gm6303-201ENSMUST00000210123 471 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim28Q62318 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim28Q62318 Gm24626-201ENSMUST00000082621 161 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Trim28Q62318 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Trim28Q62318 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.11□□□□□ -1.59
Trim28Q62318 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim28Q62318 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim28Q62318 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim28Q62318 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim28Q62318 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 Mir676-201ENSMUST00000102443 89 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm13650-201ENSMUST00000117729 433 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm15994-201ENSMUST00000118029 402 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm12878-201ENSMUST00000118744 332 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm14238-201ENSMUST00000120227 323 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm13788-201ENSMUST00000120767 601 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm22478-201ENSMUST00000122570 154 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim28Q62318 Gm25909-201ENSMUST00000157619 121 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm24853-201ENSMUST00000158026 121 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Trim28Q62318 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim28Q62318 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm28404-201ENSMUST00000190242 453 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim28Q62318 Gm36985-201ENSMUST00000195595 379 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim28Q62318 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 Gm18120-201ENSMUST00000220079 511 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim28Q62318 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim28Q62318 Gm23846-201ENSMUST00000083835 107 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Gm22868-201ENSMUST00000083955 164 ntBASIC5.1□□□□□ -1.59
Trim28Q62318 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim28Q62318 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim28Q62318 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms