Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm19244-201ENSMUST00000204340 253 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.12□□□□□ -1.91
Six4Q61321 Gm45380-201ENSMUST00000210465 315 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Gm45247-201ENSMUST00000210757 309 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Gm9712-201ENSMUST00000210842 311 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Gm45814-201ENSMUST00000212646 775 ntBASIC3.12□□□□□ -1.91
Six4Q61321 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Gm9628-201ENSMUST00000222169 725 ntBASIC3.12□□□□□ -1.91
Six4Q61321 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.12□□□□□ -1.91
Six4Q61321 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Six4Q61321 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.12□□□□□ -1.91
Six4Q61321 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Six4Q61321 Snora70-201ENSMUST00000083047 137 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Six4Q61321 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Six4Q61321 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Six4Q61321 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.12□□□□□ -1.91
Six4Q61321 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Six4Q61321 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Six4Q61321 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Six4Q61321 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Six4Q61321 Gm24127-201ENSMUST00000104110 130 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Six4Q61321 Gm14142-201ENSMUST00000117833 296 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm12105-201ENSMUST00000120846 779 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.11□□□□□ -1.91
Six4Q61321 Gm23167-201ENSMUST00000157155 103 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm22187-201ENSMUST00000157819 129 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Six4Q61321 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.11□□□□□ -1.91
Six4Q61321 Gm29011-201ENSMUST00000191059 712 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm29523-201ENSMUST00000191415 699 ntBASIC3.11□□□□□ -1.91
Six4Q61321 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Six4Q61321 Gm43345-201ENSMUST00000199484 269 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm43415-201ENSMUST00000201934 750 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm17987-201ENSMUST00000206902 603 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Gm6112-201ENSMUST00000208037 629 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Six4Q61321 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Six4Q61321 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.11□□□□□ -1.91
Six4Q61321 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Six4Q61321 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Six4Q61321 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Six4Q61321 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
Six4Q61321 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.1□□□□□ -1.91
Six4Q61321 Mir1193-201ENSMUST00000116761 121 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm12392-201ENSMUST00000118014 938 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm14101-201ENSMUST00000121502 473 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm14162-201ENSMUST00000121985 601 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.1□□□□□ -1.91
Six4Q61321 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.1□□□□□ -1.91
Six4Q61321 Gm17117-201ENSMUST00000163665 299 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm26297-201ENSMUST00000179464 132 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.1□□□□□ -1.91
Six4Q61321 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Six4Q61321 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.1□□□□□ -1.91
Six4Q61321 Gm7142-201ENSMUST00000194232 586 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.1□□□□□ -1.91
Six4Q61321 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.1□□□□□ -1.91
Six4Q61321 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.1□□□□□ -1.91
Six4Q61321 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Six4Q61321 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Six4Q61321 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Six4Q61321 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.1□□□□□ -1.91
Six4Q61321 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.1□□□□□ -1.91
Six4Q61321 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Six4Q61321 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Six4Q61321 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Six4Q61321 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Six4Q61321 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Six4Q61321 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Six4Q61321 Gm14795-201ENSMUST00000118461 471 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm12897-201ENSMUST00000120341 250 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm3835-201ENSMUST00000120752 403 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm14845-201ENSMUST00000121259 306 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm14253-201ENSMUST00000122112 639 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm23792-201ENSMUST00000122557 93 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm25185-201ENSMUST00000157754 96 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm18520-201ENSMUST00000174783 658 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm26991-201ENSMUST00000180950 620 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm37288-201ENSMUST00000193963 334 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm43746-201ENSMUST00000200028 317 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm44964-201ENSMUST00000207011 273 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.09□□□□□ -1.91
Six4Q61321 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.09□□□□□ -1.91
Six4Q61321 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.09□□□□□ -1.91
Six4Q61321 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.09□□□□□ -1.91
Six4Q61321 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Six4Q61321 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Six4Q61321 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms