Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm29330-201ENSMUST00000190032 699 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm28500-201ENSMUST00000190286 151 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm28098-201ENSMUST00000191361 699 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm28724-202ENSMUST00000194218 295 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.96□□□□□ -1.94
Col11a1Q61245 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Col11a1Q61245 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Col11a1Q61245 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col11a1Q61245 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col11a1Q61245 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col11a1Q61245 Mir669d-201ENSMUST00000104644 121 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm13555-201ENSMUST00000121668 319 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm16236-201ENSMUST00000159588 379 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm38283-201ENSMUST00000193041 695 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col11a1Q61245 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC2.96□□□□□ -1.94
Col11a1Q61245 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col11a1Q61245 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col11a1Q61245 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col11a1Q61245 Gm24671-201ENSMUST00000104159 158 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Gm25470-201ENSMUST00000175576 111 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Gm19498-201ENSMUST00000191128 331 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Gm9696-202ENSMUST00000191541 830 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Gm38008-201ENSMUST00000195333 518 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Gm45588-201ENSMUST00000211213 630 ntBASIC2.95□□□□□ -1.94
Col11a1Q61245 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col11a1Q61245 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col11a1Q61245 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col11a1Q61245 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.94□□□□□ -1.94
Col11a1Q61245 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col11a1Q61245 Gm11943-201ENSMUST00000119473 327 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 Gm25048-201ENSMUST00000158598 91 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Col11a1Q61245 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 Gm2979-201ENSMUST00000193442 463 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col11a1Q61245 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col11a1Q61245 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC2.94□□□□□ -1.94
Col11a1Q61245 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.94□□□□□ -1.94
Col11a1Q61245 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Col11a1Q61245 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col11a1Q61245 Gm23472-201ENSMUST00000101806 191 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm23950-201ENSMUST00000104026 129 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm13756-201ENSMUST00000117618 222 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm14159-201ENSMUST00000119832 451 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm22803-201ENSMUST00000158049 283 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm24497-201ENSMUST00000177868 191 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm25939-201ENSMUST00000179876 191 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm26585-201ENSMUST00000180890 630 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm42828-201ENSMUST00000199669 469 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm23444-201ENSMUST00000082922 191 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col11a1Q61245 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col11a1Q61245 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col11a1Q61245 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col11a1Q61245 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm23960-201ENSMUST00000157206 131 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm23409-201ENSMUST00000158516 237 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Gm7582-201ENSMUST00000160831 603 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Mir7017-201ENSMUST00000184894 62 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col11a1Q61245 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.93□□□□□ -1.94
Col11a1Q61245 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col11a1Q61245 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.93□□□□□ -1.94
Col11a1Q61245 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col11a1Q61245 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Col11a1Q61245 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col11a1Q61245 Gm14125-201ENSMUST00000113442 680 ntBASIC2.92□□□□□ -1.94
Col11a1Q61245 Gm14876-201ENSMUST00000120795 327 ntBASIC2.92□□□□□ -1.94
Col11a1Q61245 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC2.92□□□□□ -1.94
Col11a1Q61245 Gm1833-201ENSMUST00000191608 682 ntBASIC2.92□□□□□ -1.94
Col11a1Q61245 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col11a1Q61245 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col11a1Q61245 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms