Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm38088-201ENSMUST00000195829 241 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm9632-201ENSMUST00000195934 643 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm9236-201ENSMUST00000196892 587 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm44058-201ENSMUST00000204335 467 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm19726-201ENSMUST00000205008 240 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Gm44634-201ENSMUST00000206119 152 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 Gm29774-201ENSMUST00000219270 436 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.24□□□□□ -1.73
CtcfQ61164 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
CtcfQ61164 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CtcfQ61164 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CtcfQ61164 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CtcfQ61164 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CtcfQ61164 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CtcfQ61164 Gm23063-201ENSMUST00000102350 93 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Mir761-201ENSMUST00000103245 76 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm15108-201ENSMUST00000116160 803 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm8757-201ENSMUST00000119660 372 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm15111-201ENSMUST00000122142 878 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Gm24014-201ENSMUST00000157728 157 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
CtcfQ61164 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm25999-201ENSMUST00000175398 133 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Mir7j-201ENSMUST00000184427 122 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Mir6401-201ENSMUST00000184499 109 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm6802-202ENSMUST00000186566 126 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC4.23□□□□□ -1.73
CtcfQ61164 Gm29545-201ENSMUST00000188878 694 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm20885-201ENSMUST00000190192 654 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.23□□□□□ -1.73
CtcfQ61164 Gm29740-201ENSMUST00000193182 655 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm36866-201ENSMUST00000193343 657 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm36047-201ENSMUST00000193659 657 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm20857-201ENSMUST00000194766 657 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm20858-201ENSMUST00000195459 657 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm19131-201ENSMUST00000203408 789 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Gm18225-201ENSMUST00000216708 742 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.23□□□□□ -1.73
CtcfQ61164 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.23□□□□□ -1.73
CtcfQ61164 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CtcfQ61164 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcfQ61164 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CtcfQ61164 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CtcfQ61164 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm25507-201ENSMUST00000116981 144 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm12433-201ENSMUST00000119659 255 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm11645-201ENSMUST00000121589 649 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Snrpert-201ENSMUST00000121967 279 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm23212-201ENSMUST00000122718 60 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm22390-201ENSMUST00000157588 325 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm26045-201ENSMUST00000157862 97 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm6395-201ENSMUST00000167639 691 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm23379-201ENSMUST00000180026 107 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CtcfQ61164 Mir6411-201ENSMUST00000183556 108 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm27236-201ENSMUST00000184147 442 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Mir3620-201ENSMUST00000184710 61 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm28597-201ENSMUST00000187664 666 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcfQ61164 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm44348-201ENSMUST00000200165 122 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm43424-201ENSMUST00000200484 253 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcfQ61164 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcfQ61164 AC156560.1-201ENSMUST00000221425 256 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Gm3565-201ENSMUST00000222670 609 ntBASIC4.22□□□□□ -1.73
CtcfQ61164 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcfQ61164 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CtcfQ61164 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CtcfQ61164 Gm26439-201ENSMUST00000082592 106 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms