Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm22187-201ENSMUST00000157819 129 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm25432-201ENSMUST00000158284 66 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm18660-201ENSMUST00000199542 629 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm9375-201ENSMUST00000208899 903 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm44594-201ENSMUST00000208982 407 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm18602-201ENSMUST00000209794 851 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm45701-201ENSMUST00000212049 235 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm24144-201ENSMUST00000082632 111 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm23738-201ENSMUST00000082828 171 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Mir323-201ENSMUST00000083683 86 ntBASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav5d-4Q5R1F6 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm15074-201ENSMUST00000117603 936 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm15019-201ENSMUST00000120148 434 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm14591-201ENSMUST00000120407 518 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm43489-201ENSMUST00000196810 993 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm29815-201ENSMUST00000202418 178 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Gm7948-201ENSMUST00000212607 844 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Mir21a-201ENSMUST00000083521 92 ntBASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav5d-4Q5R1F6 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm13614-201ENSMUST00000117306 503 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm12954-201ENSMUST00000118610 611 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm15195-201ENSMUST00000118775 263 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm6071-201ENSMUST00000119561 440 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm14577-201ENSMUST00000121134 256 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm13210-201ENSMUST00000121483 273 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm15065-201ENSMUST00000121699 273 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm14162-201ENSMUST00000121985 601 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm14903-201ENSMUST00000122435 537 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm23168-201ENSMUST00000157156 143 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm18384-201ENSMUST00000195974 808 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm31532-201ENSMUST00000203555 767 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm45105-201ENSMUST00000207824 397 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm5649-201ENSMUST00000217918 951 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gm22739-201ENSMUST00000083437 160 ntBASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav5d-4Q5R1F6 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm23942-201ENSMUST00000101956 107 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm15001-201ENSMUST00000117657 795 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm5754-201ENSMUST00000118774 892 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm11414-201ENSMUST00000121795 263 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm11229-201ENSMUST00000121993 437 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm23213-201ENSMUST00000122715 313 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm16147-201ENSMUST00000162143 373 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Mir5123-201ENSMUST00000177794 83 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm7870-201ENSMUST00000184467 616 ntBASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav5d-4Q5R1F6 Gm7142-201ENSMUST00000194232 586 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms