Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm6058-201ENSMUST00000154261 399 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm26349-201ENSMUST00000157530 130 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Mir1947-201ENSMUST00000158235 85 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm22769-201ENSMUST00000158367 98 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm25713-201ENSMUST00000158625 109 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Nron-204ENSMUST00000158971 370 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm20534-201ENSMUST00000172957 172 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm25026-201ENSMUST00000175017 188 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm26365-201ENSMUST00000179177 94 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm27875-201ENSMUST00000184425 123 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm29064-201ENSMUST00000187014 813 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm28439-201ENSMUST00000187714 876 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm37343-201ENSMUST00000192542 111 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm5551-201ENSMUST00000199720 690 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm43478-201ENSMUST00000200381 292 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm37064-201ENSMUST00000193851 2231 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm22072-201ENSMUST00000116850 121 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm15480-201ENSMUST00000120442 519 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm11414-201ENSMUST00000121795 263 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm23540-201ENSMUST00000157543 164 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Mir3112-201ENSMUST00000175431 82 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Mir3090-201ENSMUST00000175597 87 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm21756-201ENSMUST00000178380 930 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm21405-201ENSMUST00000179024 930 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm26701-201ENSMUST00000181571 234 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm27796-201ENSMUST00000183863 261 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm21191-201ENSMUST00000186484 930 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm29503-201ENSMUST00000191044 930 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm20203-201ENSMUST00000192352 332 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm44852-201ENSMUST00000207950 369 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm45742-201ENSMUST00000212400 433 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm18892-201ENSMUST00000217628 881 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm7099-201ENSMUST00000080066 554 ntBASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav3-3Q5R1C3 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm15613-201ENSMUST00000118396 326 ntBASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm14731-201ENSMUST00000119216 376 ntBASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm11456-201ENSMUST00000121070 256 ntBASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm13210-201ENSMUST00000121483 273 ntBASIC2.51□□□□□ -2.01
Trav3-3Q5R1C3 Gm15065-201ENSMUST00000121699 273 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms