Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28552-201ENSMUST00000190725 388 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm25203-202ENSMUST00000200458 216 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm9712-201ENSMUST00000210842 311 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm22245-201ENSMUST00000082479 103 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Gm25203-201ENSMUST00000082842 215 ntBASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Upf3bQ3ULL6 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm24127-201ENSMUST00000104110 130 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm5754-201ENSMUST00000118774 892 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm12495-201ENSMUST00000119750 447 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm13131-201ENSMUST00000122228 321 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm15116-201ENSMUST00000122248 663 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm22187-201ENSMUST00000157819 129 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm27155-201ENSMUST00000183716 898 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm29452-201ENSMUST00000187996 313 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm28860-201ENSMUST00000188103 313 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm37104-201ENSMUST00000193278 196 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm43214-201ENSMUST00000199242 352 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm44665-201ENSMUST00000205381 251 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm44964-201ENSMUST00000207011 273 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm23447-201ENSMUST00000082798 163 ntBASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Upf3bQ3ULL6 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm12723-201ENSMUST00000120700 451 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm14162-201ENSMUST00000121985 601 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm11344-201ENSMUST00000122011 335 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm8840-201ENSMUST00000122454 386 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm14389-201ENSMUST00000140453 241 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm25942-201ENSMUST00000180080 110 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm6841-201ENSMUST00000220602 598 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm23846-201ENSMUST00000083835 107 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.26□□□□□ -1.89
Upf3bQ3ULL6 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm14142-201ENSMUST00000117833 296 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm3835-201ENSMUST00000120752 403 ntBASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3bQ3ULL6 Gm20651-201ENSMUST00000177219 329 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms