Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm25097-201ENSMUST00000104042 145 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm15125-201ENSMUST00000116185 800 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm15116-201ENSMUST00000122248 663 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm23326-201ENSMUST00000157419 105 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm16490-201ENSMUST00000165299 351 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm38281-201ENSMUST00000192301 315 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm37288-201ENSMUST00000193963 334 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm45878-201ENSMUST00000211839 241 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm18903-201ENSMUST00000215343 480 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm25403-201ENSMUST00000082971 143 ntBASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trafd1Q3UDK1 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm26377-201ENSMUST00000102184 108 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm12025-201ENSMUST00000117768 144 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm14162-201ENSMUST00000121985 601 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm24914-201ENSMUST00000157285 313 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm23755-201ENSMUST00000157578 343 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm28591-201ENSMUST00000185259 183 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm37418-201ENSMUST00000195031 274 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm18433-202ENSMUST00000195682 196 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm45420-201ENSMUST00000211243 425 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm23452-201ENSMUST00000083327 107 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm23136-201ENSMUST00000083425 99 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm10161-201ENSMUST00000091506 204 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Mir465-201ENSMUST00000093563 74 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trafd1Q3UDK1 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm11404-201ENSMUST00000120872 494 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm15142-201ENSMUST00000121013 856 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm12276-201ENSMUST00000121709 301 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm14581-201ENSMUST00000121726 198 ntBASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trafd1Q3UDK1 Gm25520-201ENSMUST00000158389 118 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms