Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm26457-201ENSMUST00000082678 78 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm23238-201ENSMUST00000083007 164 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col9a1Q05722 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col9a1Q05722 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col9a1Q05722 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.79□□□□□ -1.48
Col9a1Q05722 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Col9a1Q05722 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col9a1Q05722 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm22496-201ENSMUST00000104493 88 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm27387-201ENSMUST00000184583 116 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Mir6400-201ENSMUST00000184870 92 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Mir721-201ENSMUST00000200230 88 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm7726-201ENSMUST00000206241 231 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm45778-201ENSMUST00000211959 153 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 AC173345.2-201ENSMUST00000222795 153 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 AC183092.1-201ENSMUST00000224301 153 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.78□□□□□ -1.48
Col9a1Q05722 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col9a1Q05722 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col9a1Q05722 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
Col9a1Q05722 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Col9a1Q05722 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm23274-201ENSMUST00000104056 130 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm12125-201ENSMUST00000117261 736 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm12568-201ENSMUST00000117362 624 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm14880-201ENSMUST00000117581 292 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm11196-201ENSMUST00000119052 395 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm11718-201ENSMUST00000119942 537 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm11785-201ENSMUST00000120165 601 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm7308-201ENSMUST00000121087 447 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm25293-201ENSMUST00000122792 285 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm26195-201ENSMUST00000175035 101 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm37421-201ENSMUST00000193088 132 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm7990-201ENSMUST00000212126 593 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.77□□□□□ -1.49
Col9a1Q05722 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col9a1Q05722 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col9a1Q05722 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms