Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm38334-201ENSMUST00000195060 313 ntBASIC2.7□□□□□ -1.98
HttP42859 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HttP42859 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HttP42859 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.7□□□□□ -1.98
HttP42859 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.7□□□□□ -1.98
HttP42859 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
HttP42859 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HttP42859 Gm24858-201ENSMUST00000158058 323 ntBASIC2.69□□□□□ -1.98
HttP42859 Gm22257-201ENSMUST00000158687 301 ntBASIC2.69□□□□□ -1.98
HttP42859 Gm43901-201ENSMUST00000203247 453 ntBASIC2.69□□□□□ -1.98
HttP42859 Gm45105-201ENSMUST00000207824 397 ntBASIC2.69□□□□□ -1.98
HttP42859 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HttP42859 Gm9818-201ENSMUST00000050900 255 ntBASIC2.69□□□□□ -1.98
HttP42859 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HttP42859 Gm24261-201ENSMUST00000083744 104 ntBASIC2.69□□□□□ -1.98
HttP42859 Gm21286-201ENSMUST00000098035 545 ntBASIC2.69□□□□□ -1.98
HttP42859 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.69□□□□□ -1.98
HttP42859 Snora23-201ENSMUST00000082517 184 ntBASIC2.69□□□□□ -1.98
HttP42859 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
HttP42859 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HttP42859 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC2.68□□□□□ -1.98
HttP42859 Gm14448-201ENSMUST00000116383 210 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm24840-201ENSMUST00000122603 147 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm24638-201ENSMUST00000179807 132 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.68□□□□□ -1.98
HttP42859 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HttP42859 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC2.68□□□□□ -1.98
HttP42859 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.68□□□□□ -1.98
HttP42859 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HttP42859 BC055308-201ENSMUST00000193380 2538 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.68□□□□□ -1.98
HttP42859 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HttP42859 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HttP42859 Gm14589-201ENSMUST00000121640 727 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.68□□□□□ -1.98
HttP42859 Trav20-201ENSMUST00000142754 347 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.68□□□□□ -1.98
HttP42859 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm43276-201ENSMUST00000199712 364 ntBASIC2.68□□□□□ -1.98
HttP42859 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.68□□□□□ -1.98
HttP42859 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HttP42859 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.68□□□□□ -1.98
HttP42859 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.68□□□□□ -1.98
HttP42859 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HttP42859 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HttP42859 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm24212-201ENSMUST00000158258 132 ntBASIC2.68□□□□□ -1.98
HttP42859 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm29657-201ENSMUST00000189807 342 ntBASIC2.68□□□□□ -1.98
HttP42859 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HttP42859 Gm45735-201ENSMUST00000212779 319 ntBASIC2.68□□□□□ -1.98
HttP42859 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm8249-201ENSMUST00000219225 465 ntBASIC2.68□□□□□ -1.98
HttP42859 Gm23140-201ENSMUST00000082487 107 ntBASIC2.68□□□□□ -1.98
HttP42859 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC2.68□□□□□ -1.98
HttP42859 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.67□□□□□ -1.98
HttP42859 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.67□□□□□ -1.98
HttP42859 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HttP42859 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.67□□□□□ -1.98
HttP42859 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HttP42859 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HttP42859 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HttP42859 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HttP42859 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HttP42859 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
HttP42859 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.67□□□□□ -1.98
HttP42859 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC2.67□□□□□ -1.98
HttP42859 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC2.67□□□□□ -1.98
HttP42859 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC2.67□□□□□ -1.98
HttP42859 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC2.67□□□□□ -1.98
HttP42859 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.67□□□□□ -1.98
HttP42859 Gm42841-201ENSMUST00000199806 1932 ntBASIC2.67□□□□□ -1.98
HttP42859 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.67□□□□□ -1.98
HttP42859 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HttP42859 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HttP42859 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HttP42859 Gm15183-201ENSMUST00000118933 348 ntBASIC2.66□□□□□ -1.98
HttP42859 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HttP42859 Gm28623-201ENSMUST00000187219 192 ntBASIC2.66□□□□□ -1.98
HttP42859 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HttP42859 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HttP42859 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HttP42859 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HttP42859 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.66□□□□□ -1.98
HttP42859 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HttP42859 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.66□□□□□ -1.98
HttP42859 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.66□□□□□ -1.98
HttP42859 Gm37677-201ENSMUST00000194520 7634 ntBASIC2.66□□□□□ -1.98
HttP42859 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC2.66□□□□□ -1.98
HttP42859 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HttP42859 Gm26077-201ENSMUST00000104064 123 ntBASIC2.66□□□□□ -1.98
HttP42859 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HttP42859 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.66□□□□□ -1.98
HttP42859 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
HttP42859 Gm14159-201ENSMUST00000119832 451 ntBASIC2.65□□□□□ -1.98
HttP42859 Gm22793-201ENSMUST00000157227 330 ntBASIC2.65□□□□□ -1.98
HttP42859 Gm25836-201ENSMUST00000158918 123 ntBASIC2.65□□□□□ -1.98
HttP42859 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms