Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm43250-201ENSMUST00000196536 273 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm6543-201ENSMUST00000197353 808 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm42578-201ENSMUST00000199960 194 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm18540-201ENSMUST00000204025 526 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm4045-201ENSMUST00000204076 310 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm3816-201ENSMUST00000209803 433 ntBASIC5.42□□□□□ -1.54
Msx1P13297 AC124182.1-201ENSMUST00000227091 321 ntBASIC5.42□□□□□ -1.54
Msx1P13297 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm6065-201ENSMUST00000081336 492 ntBASIC5.42□□□□□ -1.54
Msx1P13297 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm23737-201ENSMUST00000082547 159 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm22297-201ENSMUST00000083312 106 ntBASIC5.42□□□□□ -1.54
Msx1P13297 Gm10813-201ENSMUST00000099936 90 ntBASIC5.42□□□□□ -1.54
Msx1P13297 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Msx1P13297 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Msx1P13297 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Msx1P13297 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Msx1P13297 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msx1P13297 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msx1P13297 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.41□□□□□ -1.54
Msx1P13297 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Gm23577-201ENSMUST00000103950 110 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Gm25758-201ENSMUST00000103987 129 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Gm12488-201ENSMUST00000122449 499 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Gm22384-201ENSMUST00000158187 104 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Gm24295-201ENSMUST00000158298 131 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.41□□□□□ -1.54
Msx1P13297 Gm24520-201ENSMUST00000179510 110 ntBASIC5.41□□□□□ -1.54
Msx1P13297 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC5.41□□□□□ -1.54
Msx1P13297 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.41□□□□□ -1.54
Msx1P13297 Gm44844-201ENSMUST00000207242 336 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Gm10709-201ENSMUST00000213318 480 ntBASIC5.41□□□□□ -1.54
Msx1P13297 Gm25815-201ENSMUST00000082755 107 ntBASIC5.41□□□□□ -1.54
Msx1P13297 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msx1P13297 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msx1P13297 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Msx1P13297 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msx1P13297 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Msx1P13297 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Msx1P13297 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Msx1P13297 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Msx1P13297 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Msx1P13297 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Msx1P13297 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Msx1P13297 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Msx1P13297 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.4□□□□□ -1.54
Msx1P13297 Gm22784-201ENSMUST00000104088 132 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm11572-201ENSMUST00000119164 120 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm25826-201ENSMUST00000157090 137 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm22766-201ENSMUST00000158372 99 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.4□□□□□ -1.54
Msx1P13297 Gm23631-201ENSMUST00000175291 123 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm22118-201ENSMUST00000175593 171 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm9379-201ENSMUST00000196790 646 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.4□□□□□ -1.54
Msx1P13297 Gm44960-201ENSMUST00000207403 141 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.4□□□□□ -1.54
Msx1P13297 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.4□□□□□ -1.54
Msx1P13297 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.4□□□□□ -1.54
Msx1P13297 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.4□□□□□ -1.54
Msx1P13297 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm7381-201ENSMUST00000098958 300 ntBASIC5.4□□□□□ -1.54
Msx1P13297 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Msx1P13297 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.4□□□□□ -1.55
Msx1P13297 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Msx1P13297 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.4□□□□□ -1.55
Msx1P13297 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Msx1P13297 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.4□□□□□ -1.55
Msx1P13297 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Msx1P13297 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.4□□□□□ -1.55
Msx1P13297 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Msx1P13297 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Msx1P13297 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Msx1P13297 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Msx1P13297 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms