Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC137950.3-201ENSMUST00000228250 246 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.07□□□□□ -1.92
Col1a1P11087 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col1a1P11087 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col1a1P11087 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col1a1P11087 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.06□□□□□ -1.92
Col1a1P11087 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.06□□□□□ -1.92
Col1a1P11087 Gm43925-201ENSMUST00000203498 206 ntBASIC3.06□□□□□ -1.92
Col1a1P11087 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col1a1P11087 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col1a1P11087 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.06□□□□□ -1.92
Col1a1P11087 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col1a1P11087 Gm23951-201ENSMUST00000104029 132 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Gm14125-201ENSMUST00000113442 680 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Gm11877-201ENSMUST00000118921 852 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col1a1P11087 Gm15974-201ENSMUST00000159103 531 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Gm20561-201ENSMUST00000188131 292 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Col1a1P11087 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Gm19418-201ENSMUST00000197436 580 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.05□□□□□ -1.92
Col1a1P11087 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col1a1P11087 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col1a1P11087 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.05□□□□□ -1.92
Col1a1P11087 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.05□□□□□ -1.92
Col1a1P11087 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.05□□□□□ -1.92
Col1a1P11087 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Col1a1P11087 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.04□□□□□ -1.92
Col1a1P11087 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Col1a1P11087 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Col1a1P11087 Gm13756-201ENSMUST00000117618 222 ntBASIC3.04□□□□□ -1.92
Col1a1P11087 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.04□□□□□ -1.92
Col1a1P11087 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Col1a1P11087 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.04□□□□□ -1.92
Col1a1P11087 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.04□□□□□ -1.92
Col1a1P11087 Gm43104-201ENSMUST00000197234 311 ntBASIC3.04□□□□□ -1.92
Col1a1P11087 Gm17893-201ENSMUST00000203017 770 ntBASIC3.04□□□□□ -1.92
Col1a1P11087 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.04□□□□□ -1.92
Col1a1P11087 Gm9377-201ENSMUST00000207227 623 ntBASIC3.04□□□□□ -1.92
Col1a1P11087 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col1a1P11087 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col1a1P11087 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col1a1P11087 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col1a1P11087 Gm15536-201ENSMUST00000121411 114 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 Gm11414-201ENSMUST00000121795 263 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.03□□□□□ -1.92
Col1a1P11087 Gm25553-201ENSMUST00000158076 79 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 Gm16111-201ENSMUST00000162128 285 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.03□□□□□ -1.92
Col1a1P11087 Gm38008-201ENSMUST00000195333 518 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.03□□□□□ -1.92
Col1a1P11087 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col1a1P11087 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.03□□□□□ -1.92
Col1a1P11087 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col1a1P11087 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col1a1P11087 Gm22752-201ENSMUST00000102083 109 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Gm25377-201ENSMUST00000104334 129 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Col1a1P11087 Gm11446-201ENSMUST00000121319 866 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Col1a1P11087 Gm22361-201ENSMUST00000158435 176 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Gm22698-201ENSMUST00000175375 108 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Gm27399-201ENSMUST00000184250 78 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Gm44161-201ENSMUST00000203532 253 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col1a1P11087 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col1a1P11087 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Col1a1P11087 Gm23738-201ENSMUST00000082828 171 ntBASIC3.03□□□□□ -1.93
Col1a1P11087 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.03□□□□□ -1.93
Col1a1P11087 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col1a1P11087 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col1a1P11087 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col1a1P11087 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col1a1P11087 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col1a1P11087 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm23867-201ENSMUST00000122649 274 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm28064-201ENSMUST00000185639 858 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm29610-201ENSMUST00000187749 453 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm37946-201ENSMUST00000192064 347 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm38041-201ENSMUST00000194445 661 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm19080-201ENSMUST00000196082 550 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm43922-201ENSMUST00000205071 328 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.02□□□□□ -1.93
Col1a1P11087 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.02□□□□□ -1.93
Col1a1P11087 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col1a1P11087 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.02□□□□□ -1.93
Col1a1P11087 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.01□□□□□ -1.93
Col1a1P11087 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms