Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm23571-201ENSMUST00000180073 127 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Mir6971-201ENSMUST00000183497 63 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Mir7037-201ENSMUST00000184414 65 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm37763-201ENSMUST00000193445 120 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm9402-201ENSMUST00000196849 388 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm19060-201ENSMUST00000201959 421 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm18007-201ENSMUST00000205019 844 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.48□□□□□ -1.69
Hoxd3P09027 AC102287.1-201ENSMUST00000211412 454 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm7990-201ENSMUST00000212126 593 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 CT485607.2-201ENSMUST00000214650 91 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm24705-201ENSMUST00000082808 107 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm25204-201ENSMUST00000082843 106 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hoxd3P09027 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Hoxd3P09027 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Hoxd3P09027 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.48□□□□□ -1.69
Hoxd3P09027 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Hoxd3P09027 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm43469-201ENSMUST00000196084 4634 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm14037-201ENSMUST00000120576 313 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm11584-201ENSMUST00000120636 325 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm15786-201ENSMUST00000121079 450 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm22959-201ENSMUST00000122514 303 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm23669-201ENSMUST00000157470 128 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm24392-201ENSMUST00000158136 103 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm24006-201ENSMUST00000158462 132 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm24667-201ENSMUST00000158938 103 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm20542-201ENSMUST00000174582 372 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm22118-201ENSMUST00000175593 171 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm23355-201ENSMUST00000177614 107 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm5558-201ENSMUST00000178933 495 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm23148-201ENSMUST00000180367 107 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm27679-201ENSMUST00000184612 84 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm28849-201ENSMUST00000188127 174 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm6651-201ENSMUST00000189471 271 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm28330-201ENSMUST00000190353 171 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm1833-201ENSMUST00000191608 682 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm9379-201ENSMUST00000196790 646 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm9480-201ENSMUST00000198038 616 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm10709-201ENSMUST00000213318 480 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm29774-201ENSMUST00000219270 436 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm6065-201ENSMUST00000081336 492 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Gm26066-201ENSMUST00000083385 109 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Mir10a-201ENSMUST00000083585 110 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 AC152944.1-201ENSMUST00000220160 3101 ntBASIC4.47□□□□□ -1.69
Hoxd3P09027 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Hoxd3P09027 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hoxd3P09027 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Hoxd3P09027 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.46□□□□□ -1.69
Hoxd3P09027 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Hoxd3P09027 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Hoxd3P09027 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Hoxd3P09027 Gm45413-201ENSMUST00000210389 3538 ntBASIC4.46□□□□□ -1.69
Hoxd3P09027 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm26078-201ENSMUST00000104067 128 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm24886-201ENSMUST00000104384 123 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 503.2 ms