Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm3867-201ENSMUST00000086108 279 ntBASIC4.04□□□□□ -1.76
Lmx1bO88609 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lmx1bO88609 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lmx1bO88609 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lmx1bO88609 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Lmx1bO88609 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.04□□□□□ -1.76
Lmx1bO88609 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lmx1bO88609 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.04□□□□□ -1.76
Lmx1bO88609 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Lmx1bO88609 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Lmx1bO88609 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
Lmx1bO88609 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lmx1bO88609 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lmx1bO88609 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.04□□□□□ -1.76
Lmx1bO88609 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Lmx1bO88609 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm24275-201ENSMUST00000116780 146 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm11698-201ENSMUST00000117948 455 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm15988-201ENSMUST00000118677 367 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm6062-201ENSMUST00000120462 631 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm23124-201ENSMUST00000157650 107 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm24757-201ENSMUST00000176987 371 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm22716-201ENSMUST00000177596 107 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm22243-201ENSMUST00000178754 120 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm21816-201ENSMUST00000179255 360 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Mir6414-201ENSMUST00000183685 82 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm28390-201ENSMUST00000185212 700 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm29134-201ENSMUST00000186579 126 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm29479-201ENSMUST00000190352 455 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm28241-201ENSMUST00000190916 235 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm33354-201ENSMUST00000195448 906 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm42830-201ENSMUST00000196642 313 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm43304-201ENSMUST00000196803 326 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm43559-201ENSMUST00000198755 466 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm17811-201ENSMUST00000206193 387 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.03□□□□□ -1.76
Lmx1bO88609 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lmx1bO88609 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Lmx1bO88609 Gm26056-201ENSMUST00000083043 104 ntBASIC4.03□□□□□ -1.76
Lmx1bO88609 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lmx1bO88609 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lmx1bO88609 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lmx1bO88609 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Lmx1bO88609 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Lmx1bO88609 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Lmx1bO88609 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Lmx1bO88609 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Lmx1bO88609 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lmx1bO88609 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Lmx1bO88609 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lmx1bO88609 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lmx1bO88609 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lmx1bO88609 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lmx1bO88609 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm24608-201ENSMUST00000104381 136 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm22493-201ENSMUST00000104494 132 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm14591-201ENSMUST00000120407 518 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm22480-201ENSMUST00000122568 128 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lmx1bO88609 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm29196-201ENSMUST00000189239 618 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Npn2-202ENSMUST00000189275 235 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lmx1bO88609 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm44373-201ENSMUST00000196112 169 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Mir6375-201ENSMUST00000197176 95 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm44376-201ENSMUST00000197570 128 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm42758-201ENSMUST00000202146 283 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Gm44879-201ENSMUST00000207007 503 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lmx1bO88609 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.02□□□□□ -1.77
Lmx1bO88609 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms