Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm7327-201ENSMUST00000120925 652 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm8880-201ENSMUST00000121800 454 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm23048-201ENSMUST00000157237 129 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm23268-201ENSMUST00000175494 78 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC2.62□□□□□ -1.99
Col5a1O88207 Gm23128-202ENSMUST00000196578 133 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Col5a1O88207 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.62□□□□□ -1.99
Col5a1O88207 AC211878.5-201ENSMUST00000221697 409 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Col5a1O88207 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col5a1O88207 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col5a1O88207 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Col5a1O88207 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col5a1O88207 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Col5a1O88207 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
Col5a1O88207 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col5a1O88207 AC147615.2-201ENSMUST00000219876 2154 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm44624-201ENSMUST00000208700 2278 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.61□□□□□ -1.99
Col5a1O88207 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm15421-202ENSMUST00000118224 399 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm15936-201ENSMUST00000118706 460 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm20718-201ENSMUST00000176058 259 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm37377-201ENSMUST00000191733 304 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm42526-201ENSMUST00000198956 393 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC2.61□□□□□ -1.99
Col5a1O88207 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm7422-201ENSMUST00000220115 640 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm25699-201ENSMUST00000082896 167 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm10343-201ENSMUST00000096279 348 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col5a1O88207 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col5a1O88207 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm23060-201ENSMUST00000102345 109 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm23803-201ENSMUST00000104610 132 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm6373-201ENSMUST00000121026 360 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col5a1O88207 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.61□□□□□ -1.99
Col5a1O88207 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm8209-201ENSMUST00000206386 553 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm44623-201ENSMUST00000207934 434 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm2436-201ENSMUST00000219562 774 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col5a1O88207 Mir410-201ENSMUST00000083563 81 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Gm37626-201ENSMUST00000194332 4563 ntBASIC2.61□□□□□ -1.99
Col5a1O88207 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col5a1O88207 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col5a1O88207 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col5a1O88207 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
Col5a1O88207 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Gm25500-201ENSMUST00000104426 123 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Gm5384-201ENSMUST00000120313 463 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Gm14578-201ENSMUST00000122166 391 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Gm14363-201ENSMUST00000122304 409 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col5a1O88207 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.6□□□□□ -1.99
Col5a1O88207 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Gm25476-201ENSMUST00000175125 185 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col5a1O88207 Gm10925-201ENSMUST00000189941 678 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.6□□□□□ -1.99
Col5a1O88207 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.6□□□□□ -1.99
Col5a1O88207 Gm45240-201ENSMUST00000211437 674 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.6□□□□□ -1.99
Col5a1O88207 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.6□□□□□ -1.99
Col5a1O88207 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col5a1O88207 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col5a1O88207 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col5a1O88207 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col5a1O88207 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col5a1O88207 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Col5a1O88207 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col5a1O88207 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col5a1O88207 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Col5a1O88207 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms