Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm22264-201ENSMUST00000178200 107 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm45382-201ENSMUST00000210607 151 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm5175-202ENSMUST00000219699 529 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm26063-201ENSMUST00000083378 107 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Cacna1bO55017 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm25068-201ENSMUST00000103895 110 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm16355-201ENSMUST00000128606 231 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm28614-201ENSMUST00000186483 458 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm20776-201ENSMUST00000189940 700 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
Cacna1bO55017 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.47□□□□□ -2.01
Cacna1bO55017 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cacna1bO55017 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Cacna1bO55017 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Cacna1bO55017 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm42841-201ENSMUST00000199806 1932 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm14607-201ENSMUST00000119119 491 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm29610-201ENSMUST00000187749 453 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm28466-201ENSMUST00000190678 659 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm18698-201ENSMUST00000192327 668 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm17893-201ENSMUST00000203017 770 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.46□□□□□ -2.02
Cacna1bO55017 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cacna1bO55017 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm11943-201ENSMUST00000119473 327 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cacna1bO55017 Mir6997-201ENSMUST00000184313 71 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm27648-201ENSMUST00000184315 107 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm42539-201ENSMUST00000197009 308 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm43295-201ENSMUST00000201439 412 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 Gm5374-201ENSMUST00000222868 657 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 AC156560.3-201ENSMUST00000222978 3841 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 AC117202.1-201ENSMUST00000227007 445 ntBASIC2.46□□□□□ -2.02
Cacna1bO55017 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cacna1bO55017 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm24273-201ENSMUST00000102332 164 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm28149-201ENSMUST00000187102 378 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm28768-201ENSMUST00000189034 378 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm37293-201ENSMUST00000191658 295 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm43427-201ENSMUST00000198188 331 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Cacna1bO55017 AC211878.5-201ENSMUST00000221697 409 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Cacna1bO55017 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm14977-201ENSMUST00000121626 812 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm22803-201ENSMUST00000158049 283 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm23548-201ENSMUST00000158963 106 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Gm45259-201ENSMUST00000209217 1006 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.45□□□□□ -2.02
Cacna1bO55017 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cacna1bO55017 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cacna1bO55017 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cacna1bO55017 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cacna1bO55017 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Cacna1bO55017 Gm27786-201ENSMUST00000184337 70 ntBASIC2.44□□□□□ -2.02
Cacna1bO55017 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.44□□□□□ -2.02
Cacna1bO55017 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.44□□□□□ -2.02
Cacna1bO55017 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.44□□□□□ -2.02
Cacna1bO55017 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cacna1bO55017 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cacna1bO55017 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.44□□□□□ -2.02
Cacna1bO55017 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms