Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm24581-201ENSMUST00000103962 133 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm23273-201ENSMUST00000104058 135 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm15108-201ENSMUST00000116160 803 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm16400-201ENSMUST00000116523 1029 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm13359-201ENSMUST00000119000 695 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm12691-201ENSMUST00000120186 456 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm7350-201ENSMUST00000120964 636 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm11797-201ENSMUST00000121336 754 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm15111-201ENSMUST00000122142 878 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm24936-201ENSMUST00000122598 247 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.53□□□□□ -2
Ccr6O54689 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccr6O54689 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccr6O54689 Gm23084-201ENSMUST00000157850 114 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm16563-201ENSMUST00000162673 423 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm8338-201ENSMUST00000163928 363 ntBASIC2.53□□□□□ -2
Ccr6O54689 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccr6O54689 Gm9587-201ENSMUST00000172449 454 ntBASIC2.53□□□□□ -2
Ccr6O54689 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.53□□□□□ -2
Ccr6O54689 Gm26866-201ENSMUST00000180414 802 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.53□□□□□ -2
Ccr6O54689 Mir3620-201ENSMUST00000184710 61 ntBASIC2.53□□□□□ -2
Ccr6O54689 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.53□□□□□ -2
Ccr6O54689 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.53□□□□□ -2
Ccr6O54689 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.53□□□□□ -2
Ccr6O54689 Gm44355-201ENSMUST00000200417 104 ntBASIC2.53□□□□□ -2
Ccr6O54689 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccr6O54689 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.53□□□□□ -2
Ccr6O54689 Gm19126-201ENSMUST00000207896 509 ntBASIC2.53□□□□□ -2
Ccr6O54689 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.53□□□□□ -2
Ccr6O54689 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.53□□□□□ -2
Ccr6O54689 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccr6O54689 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.53□□□□□ -2
Ccr6O54689 AC140209.1-201ENSMUST00000227875 284 ntBASIC2.53□□□□□ -2
Ccr6O54689 Gm9765-201ENSMUST00000043170 321 ntBASIC2.53□□□□□ -2
Ccr6O54689 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccr6O54689 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccr6O54689 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccr6O54689 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccr6O54689 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Ccr6O54689 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccr6O54689 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 Gm14987-201ENSMUST00000117820 676 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm11577-201ENSMUST00000118030 737 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm15268-201ENSMUST00000118845 352 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm12803-201ENSMUST00000118907 821 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.52□□□□□ -2.01
Ccr6O54689 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 Gm26088-201ENSMUST00000157896 131 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm22726-201ENSMUST00000158089 179 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm23895-201ENSMUST00000158108 160 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm23409-201ENSMUST00000158516 237 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ccr6O54689 Mir3473f-201ENSMUST00000183743 136 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Mir7074-201ENSMUST00000183884 63 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.52□□□□□ -2.01
Ccr6O54689 Gm37097-201ENSMUST00000193676 336 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm37007-201ENSMUST00000194234 319 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm43489-201ENSMUST00000196810 993 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ccr6O54689 Gm17838-201ENSMUST00000205872 876 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm18704-201ENSMUST00000219736 446 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccr6O54689 Gm23850-201ENSMUST00000083830 169 ntBASIC2.52□□□□□ -2.01
Ccr6O54689 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccr6O54689 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ccr6O54689 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccr6O54689 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ccr6O54689 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccr6O54689 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ccr6O54689 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ccr6O54689 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ccr6O54689 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Ccr6O54689 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ccr6O54689 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ccr6O54689 Mir592-201ENSMUST00000102113 96 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ccr6O54689 Mir294-201ENSMUST00000104710 84 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Gm6429-201ENSMUST00000117144 475 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Gm14469-201ENSMUST00000118363 202 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Gm14840-201ENSMUST00000122135 594 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Gm15147-201ENSMUST00000122263 483 ntBASIC2.51□□□□□ -2.01
Ccr6O54689 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC2.51□□□□□ -2.01
Ccr6O54689 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms