Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm23750-201ENSMUST00000104222 132 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm11367-201ENSMUST00000117802 120 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm14878-201ENSMUST00000118167 293 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm14067-201ENSMUST00000119340 314 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm7363-201ENSMUST00000119883 399 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm11229-201ENSMUST00000121993 437 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm25827-201ENSMUST00000157089 107 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm24940-201ENSMUST00000158326 108 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm7335-201ENSMUST00000172475 373 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm26189-201ENSMUST00000179879 107 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm28500-201ENSMUST00000190286 151 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm45032-201ENSMUST00000205375 520 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm19126-201ENSMUST00000207896 509 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm25755-201ENSMUST00000083396 107 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.8□□□□□ -1.64
Trim55G3X8Y1 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm11322-201ENSMUST00000118095 435 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm14627-201ENSMUST00000118931 567 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm12578-201ENSMUST00000121244 417 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm14638-201ENSMUST00000121338 216 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm11894-201ENSMUST00000121579 328 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm12872-201ENSMUST00000121835 320 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm22059-201ENSMUST00000157544 104 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm22849-201ENSMUST00000157713 307 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm15900-201ENSMUST00000161584 342 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Mir5112-201ENSMUST00000174897 60 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Mir5098-201ENSMUST00000175320 82 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm20656-201ENSMUST00000176925 518 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm28017-201ENSMUST00000183434 126 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm27385-201ENSMUST00000184747 104 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm2914-201ENSMUST00000186120 328 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm28069-201ENSMUST00000189926 214 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm37568-201ENSMUST00000191755 364 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm19243-201ENSMUST00000198592 269 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm44521-201ENSMUST00000206469 217 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm20102-201ENSMUST00000222445 220 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm23096-201ENSMUST00000083447 107 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm6177-201ENSMUST00000085589 465 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 BC051076-202ENSMUST00000199477 2868 ntBASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trim55G3X8Y1 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm11576-201ENSMUST00000117433 417 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm12074-201ENSMUST00000120189 219 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm25982-201ENSMUST00000157920 101 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms