Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm13439-201ENSMUST00000117541 409 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm15112-201ENSMUST00000120152 860 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm13232-201ENSMUST00000121816 632 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm23463-201ENSMUST00000122468 99 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm24780-201ENSMUST00000157635 143 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm24784-201ENSMUST00000157640 62 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm24690-201ENSMUST00000157759 97 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm24240-201ENSMUST00000157785 135 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm7609-204ENSMUST00000161424 461 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm21726-201ENSMUST00000179654 392 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm24415-201ENSMUST00000180218 107 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Mir6393-201ENSMUST00000183709 94 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm29159-201ENSMUST00000187969 379 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm43407-201ENSMUST00000199816 317 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm43554-201ENSMUST00000199987 186 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm29884-201ENSMUST00000218403 453 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm18442-201ENSMUST00000220925 639 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Pcdh1F7BJK1 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Pcdh1F7BJK1 Gm23193-201ENSMUST00000102427 82 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm23910-201ENSMUST00000104597 132 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm25565-201ENSMUST00000104605 105 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm12261-201ENSMUST00000117499 645 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm16089-201ENSMUST00000117679 336 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm7219-201ENSMUST00000119619 297 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm11481-201ENSMUST00000120069 255 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm13533-201ENSMUST00000121104 177 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm13511-201ENSMUST00000121167 363 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm15147-201ENSMUST00000122263 483 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm23959-201ENSMUST00000157208 324 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm27999-201ENSMUST00000183539 193 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm28163-201ENSMUST00000187099 325 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm28468-201ENSMUST00000188536 615 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm19326-201ENSMUST00000219818 326 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Gm6988-201ENSMUST00000222676 375 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 AC154271.1-201ENSMUST00000224780 383 ntBASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Pcdh1F7BJK1 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms