Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Gm14125-201ENSMUST00000113442 680 ntBASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Gm12432-201ENSMUST00000119540 186 ntBASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col6a3E9PWQ3 Gm12387-201ENSMUST00000118573 955 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm13788-201ENSMUST00000120767 601 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Snord92-201ENSMUST00000175548 85 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm12467-201ENSMUST00000117625 745 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm12550-201ENSMUST00000118478 329 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm23885-201ENSMUST00000122682 294 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm43083-201ENSMUST00000199594 476 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm25402-201ENSMUST00000082966 131 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm43526-201ENSMUST00000196666 1565 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm3623-201ENSMUST00000173643 2747 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm26080-201ENSMUST00000104069 131 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm28788-201ENSMUST00000189717 375 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm29558-201ENSMUST00000190134 375 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm18644-201ENSMUST00000211458 815 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Gm42447-201ENSMUST00000200102 2903 ntBASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Col6a3E9PWQ3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm43655-201ENSMUST00000197367 222 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm43834-201ENSMUST00000197097 4830 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm44078-201ENSMUST00000204652 2646 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm24342-201ENSMUST00000103907 104 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm11890-201ENSMUST00000119585 417 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm25460-201ENSMUST00000157954 127 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Mir6394-201ENSMUST00000184738 99 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Gm28118-201ENSMUST00000185957 294 ntBASIC2.59□□□□□ -1.99
Col6a3E9PWQ3 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Col6a3E9PWQ3 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC2.59□□□□□ -2
Col6a3E9PWQ3 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.59□□□□□ -2
Col6a3E9PWQ3 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Col6a3E9PWQ3 Gm23942-201ENSMUST00000101956 107 ntBASIC2.59□□□□□ -2
Col6a3E9PWQ3 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.59□□□□□ -2
Col6a3E9PWQ3 Gm45031-201ENSMUST00000206800 288 ntBASIC2.59□□□□□ -2
Col6a3E9PWQ3 Olfr790-204ENSMUST00000218901 1070 ntBASIC2.59□□□□□ -2
Col6a3E9PWQ3 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.59□□□□□ -2
Col6a3E9PWQ3 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC2.59□□□□□ -2
Col6a3E9PWQ3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.59□□□□□ -2
Col6a3E9PWQ3 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Col6a3E9PWQ3 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.58□□□□□ -2
Col6a3E9PWQ3 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.58□□□□□ -2
Col6a3E9PWQ3 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col6a3E9PWQ3 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.58□□□□□ -2
Col6a3E9PWQ3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.58□□□□□ -2
Col6a3E9PWQ3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col6a3E9PWQ3 Gm26652-202ENSMUST00000181672 475 ntBASIC2.58□□□□□ -2
Col6a3E9PWQ3 Gm43276-201ENSMUST00000199712 364 ntBASIC2.58□□□□□ -2
Col6a3E9PWQ3 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col6a3E9PWQ3 Gm8979-201ENSMUST00000183386 7296 ntBASIC2.58□□□□□ -2
Col6a3E9PWQ3 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.58□□□□□ -2
Col6a3E9PWQ3 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms