Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 AC162934.1-201ENSMUST00000222880 309 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a5A6H584 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Mir542-201ENSMUST00000102186 85 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a5A6H584 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a5A6H584 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Gm22257-201ENSMUST00000158687 301 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 Gm18698-201ENSMUST00000192327 668 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a5A6H584 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a5A6H584 Gm5917-201ENSMUST00000217638 721 ntBASIC2.04□□□□□ -2.08
Col6a5A6H584 Gm44525-201ENSMUST00000183129 2634 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a5A6H584 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm14125-201ENSMUST00000113442 680 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm7974-201ENSMUST00000117154 408 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm28118-201ENSMUST00000185957 294 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm28623-201ENSMUST00000187219 192 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm43601-201ENSMUST00000196294 945 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 CT030166.3-201ENSMUST00000223203 193 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a5A6H584 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm14912-201ENSMUST00000120166 1773 ntBASIC2.03□□□□□ -2.08
Col6a5A6H584 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a5A6H584 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 Gm12941-201ENSMUST00000117934 220 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 Gm12550-201ENSMUST00000118478 329 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.03□□□□□ -2.09
Col6a5A6H584 Gm43901-201ENSMUST00000203247 453 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 AC126253.2-201ENSMUST00000226518 205 ntBASIC2.03□□□□□ -2.09
Col6a5A6H584 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Col6a5A6H584 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a5A6H584 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a5A6H584 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a5A6H584 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col6a5A6H584 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col6a5A6H584 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Mir6925-201ENSMUST00000197857 70 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a5A6H584 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a5A6H584 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a5A6H584 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a5A6H584 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a5A6H584 Mir711-201ENSMUST00000102188 82 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Gm15115-201ENSMUST00000121145 264 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Gm12443-201ENSMUST00000122308 323 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a5A6H584 Mir6715-201ENSMUST00000184990 57 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 AC122301.1-201ENSMUST00000219625 507 ntBASIC2.02□□□□□ -2.09
Col6a5A6H584 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC2.02□□□□□ -2.09
Col6a5A6H584 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a5A6H584 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col6a5A6H584 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Col6a5A6H584 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col6a5A6H584 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col6a5A6H584 Gm22673-201ENSMUST00000104415 131 ntBASIC2.01□□□□□ -2.09
Col6a5A6H584 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.01□□□□□ -2.09
Col6a5A6H584 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.01□□□□□ -2.09
Col6a5A6H584 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.01□□□□□ -2.09
Col6a5A6H584 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.01□□□□□ -2.09
Col6a5A6H584 Gm37732-201ENSMUST00000194377 316 ntBASIC2.01□□□□□ -2.09
Col6a5A6H584 Gm43587-201ENSMUST00000199590 204 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms