Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm29610-201ENSMUST00000187749 453 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm1833-201ENSMUST00000191608 682 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm9251-201ENSMUST00000197202 628 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm44477-201ENSMUST00000199661 110 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm45814-201ENSMUST00000212646 775 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Gm5358-201ENSMUST00000212814 353 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.19□□□□□ -2.06
Col6a4A2AX52 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col6a4A2AX52 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm12871-201ENSMUST00000118758 438 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm14930-201ENSMUST00000118864 652 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm16017-201ENSMUST00000119834 208 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm38334-201ENSMUST00000195060 313 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm45382-201ENSMUST00000210607 151 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 AC158641.1-201ENSMUST00000218933 229 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm5374-201ENSMUST00000222868 657 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm26585-201ENSMUST00000180890 630 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm18921-201ENSMUST00000221798 366 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a4A2AX52 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.18□□□□□ -2.06
Col6a4A2AX52 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm7195-201ENSMUST00000190869 1707 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm12090-201ENSMUST00000118692 758 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm44208-201ENSMUST00000205199 421 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a4A2AX52 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm15074-201ENSMUST00000117603 936 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm24532-201ENSMUST00000157951 286 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm23548-201ENSMUST00000158963 106 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm27648-201ENSMUST00000184315 107 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm28628-201ENSMUST00000187006 264 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm28629-201ENSMUST00000187309 263 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm18193-201ENSMUST00000210017 772 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a4A2AX52 Gm45654-201ENSMUST00000210980 123 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC2.17□□□□□ -2.06
Col6a4A2AX52 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.17□□□□□ -2.06
Col6a4A2AX52 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm13440-201ENSMUST00000121665 496 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Snord93-201ENSMUST00000175580 71 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm28637-201ENSMUST00000179424 345 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm25377-201ENSMUST00000104334 129 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm11221-201ENSMUST00000117230 597 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm13862-201ENSMUST00000121220 197 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm28974-201ENSMUST00000187893 231 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm45772-201ENSMUST00000212961 240 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.16□□□□□ -2.06
Col6a4A2AX52 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.16□□□□□ -2.06
Col6a4A2AX52 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.15□□□□□ -2.06
Col6a4A2AX52 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.15□□□□□ -2.06
Col6a4A2AX52 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms