Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.12□□□□□ -1.91
Scn3aA2ASI5 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Scn3aA2ASI5 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.12□□□□□ -1.91
Scn3aA2ASI5 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm25153-201ENSMUST00000157118 156 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm26585-201ENSMUST00000180890 630 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm18441-201ENSMUST00000223539 617 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm23585-201ENSMUST00000157656 102 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm43355-201ENSMUST00000196541 346 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.11□□□□□ -1.91
Scn3aA2ASI5 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm11965-201ENSMUST00000122017 277 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm20542-201ENSMUST00000174582 372 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Snord93-201ENSMUST00000175580 71 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm44519-201ENSMUST00000206486 122 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.1□□□□□ -1.91
Scn3aA2ASI5 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm11905-201ENSMUST00000117653 678 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm25808-201ENSMUST00000122784 284 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm17117-201ENSMUST00000163665 299 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm17075-201ENSMUST00000171924 670 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm1833-201ENSMUST00000191608 682 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm43393-201ENSMUST00000200147 194 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn3aA2ASI5 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Gm15195-201ENSMUST00000118775 263 ntBASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Gm24691-201ENSMUST00000157762 140 ntBASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Gm26487-201ENSMUST00000158022 94 ntBASIC3.09□□□□□ -1.92
Scn3aA2ASI5 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Mir1892-201ENSMUST00000197752 80 ntBASIC3.09□□□□□ -1.92
Scn3aA2ASI5 Gm44208-201ENSMUST00000205199 421 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms