Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm28412-201ENSMUST00000187243 177 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm42509-201ENSMUST00000197390 781 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm19243-201ENSMUST00000198592 269 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm44135-201ENSMUST00000205221 368 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm3189-201ENSMUST00000205595 832 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm39147-201ENSMUST00000211376 465 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm19219-201ENSMUST00000215863 724 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 LOC667541-201ENSMUST00000223408 278 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm4987-201ENSMUST00000078326 408 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm26439-201ENSMUST00000082592 106 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Mir346-201ENSMUST00000083547 98 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trav1A0A075B5Z4 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Mir467h-201ENSMUST00000116759 121 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm12427-201ENSMUST00000117719 302 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm12739-201ENSMUST00000119769 382 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm16331-201ENSMUST00000144274 498 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm25553-201ENSMUST00000158076 79 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm3102-201ENSMUST00000164236 489 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm17064-201ENSMUST00000167690 452 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm3851-201ENSMUST00000168653 318 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm5473-201ENSMUST00000179326 642 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm29320-201ENSMUST00000185235 615 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm29179-202ENSMUST00000186138 615 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm29448-201ENSMUST00000186675 615 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm29314-201ENSMUST00000186800 615 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm28253-202ENSMUST00000187971 615 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm29169-201ENSMUST00000189835 615 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm37097-201ENSMUST00000193676 336 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm34779-201ENSMUST00000210036 263 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Mir132-201ENSMUST00000083603 66 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Trav1A0A075B5Z4 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm14125-201ENSMUST00000113442 680 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm7974-201ENSMUST00000117154 408 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm13064-201ENSMUST00000119125 557 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm13873-201ENSMUST00000119208 427 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm16017-201ENSMUST00000119834 208 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm14926-201ENSMUST00000120650 508 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm13973-201ENSMUST00000121371 894 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm15878-201ENSMUST00000127561 306 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm23032-201ENSMUST00000157995 107 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm2389-201ENSMUST00000160487 189 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm19203-201ENSMUST00000174049 939 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm6900-201ENSMUST00000178971 342 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Mir6413-201ENSMUST00000184049 108 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Mir6418-201ENSMUST00000185075 115 ntBASIC3.1□□□□□ -1.91
Trav1A0A075B5Z4 Gm19637-201ENSMUST00000185933 579 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms