Protein–RNA interactions for Protein: Q9QUK3

Cln8, Protein CLN8, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8Q9QUK3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm6140-201ENSMUST00000192494 966 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm37428-201ENSMUST00000193886 137 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm9379-201ENSMUST00000196790 646 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Mir703-201ENSMUST00000197105 109 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm43227-201ENSMUST00000202239 677 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm44404-201ENSMUST00000203979 636 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm7726-201ENSMUST00000206241 231 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm45080-201ENSMUST00000206648 283 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm21007-201ENSMUST00000221024 326 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Cln8Q9QUK3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm24581-201ENSMUST00000103962 133 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm23530-201ENSMUST00000104564 137 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm23532-201ENSMUST00000104569 112 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm13122-201ENSMUST00000118380 453 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm13059-201ENSMUST00000119881 398 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm14600-201ENSMUST00000121032 630 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm22345-201ENSMUST00000122644 107 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm23671-201ENSMUST00000157472 103 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm25667-201ENSMUST00000157701 275 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm16147-201ENSMUST00000162143 373 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm24080-201ENSMUST00000175178 232 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm20673-201ENSMUST00000177167 430 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm44927-201ENSMUST00000207573 716 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm4528-201ENSMUST00000207905 551 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm17911-201ENSMUST00000210806 877 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm45696-201ENSMUST00000212088 985 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm18225-201ENSMUST00000216708 742 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Gm46234-201ENSMUST00000218702 259 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Cln8Q9QUK3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm25272-201ENSMUST00000104293 128 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm14879-201ENSMUST00000117308 507 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm2003-201ENSMUST00000118537 636 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm13873-201ENSMUST00000119208 427 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm1989-201ENSMUST00000126244 636 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm24537-201ENSMUST00000157950 102 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm25224-201ENSMUST00000158195 68 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm25519-201ENSMUST00000158392 127 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm17117-201ENSMUST00000163665 299 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm27522-201ENSMUST00000183949 230 ntBASIC3.04□□□□□ -1.92
Cln8Q9QUK3 Gm36943-201ENSMUST00000194422 282 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms