Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Upk3aQ9JKX8 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upk3aQ9JKX8 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm22590-201ENSMUST00000104247 128 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm14825-201ENSMUST00000113538 701 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm13761-201ENSMUST00000117238 807 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm15126-201ENSMUST00000118631 833 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm16458-201ENSMUST00000121428 502 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm14768-201ENSMUST00000122126 678 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm20542-201ENSMUST00000174582 372 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm28591-201ENSMUST00000185259 183 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm7634-201ENSMUST00000185778 553 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm42516-201ENSMUST00000198691 767 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm45409-201ENSMUST00000211486 252 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm17917-201ENSMUST00000218561 953 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm5655-201ENSMUST00000221078 901 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm18921-201ENSMUST00000221798 366 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm24533-201ENSMUST00000083138 196 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
Upk3aQ9JKX8 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm14607-201ENSMUST00000119119 491 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm15157-201ENSMUST00000121852 702 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm26020-201ENSMUST00000122729 183 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm22532-201ENSMUST00000158822 140 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm19244-201ENSMUST00000204340 253 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm7624-201ENSMUST00000209702 435 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm45380-201ENSMUST00000210465 315 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm18242-201ENSMUST00000218455 542 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm23136-201ENSMUST00000083425 99 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.16□□□□□ -1.9
Upk3aQ9JKX8 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.15□□□□□ -1.9
Upk3aQ9JKX8 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Upk3aQ9JKX8 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Upk3aQ9JKX8 Mir1193-201ENSMUST00000116761 121 ntBASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Gm6071-201ENSMUST00000119561 440 ntBASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Gm23583-201ENSMUST00000158533 289 ntBASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Gm26005-201ENSMUST00000158802 134 ntBASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Gm15946-201ENSMUST00000160654 423 ntBASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Gm6900-201ENSMUST00000178971 342 ntBASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 Gm26933-201ENSMUST00000182320 827 ntBASIC3.15□□□□□ -1.91
Upk3aQ9JKX8 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms