Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm23415-201ENSMUST00000175519 83 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Mir3090-201ENSMUST00000175597 87 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm25120-201ENSMUST00000180148 79 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm24969-201ENSMUST00000180331 79 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm18956-201ENSMUST00000192857 480 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm43853-201ENSMUST00000197162 301 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Olfr936-202ENSMUST00000216912 937 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 AC164567.4-201ENSMUST00000219708 483 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Gm17872-201ENSMUST00000222550 532 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trem1Q9JKE2 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm24120-201ENSMUST00000103978 129 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm13046-201ENSMUST00000117391 501 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm5937-201ENSMUST00000119715 643 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm23470-201ENSMUST00000157129 120 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm22890-201ENSMUST00000158642 144 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm7241-201ENSMUST00000159853 357 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm10075-201ENSMUST00000162030 545 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm26701-201ENSMUST00000181571 234 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm27414-201ENSMUST00000185033 381 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm28304-201ENSMUST00000185977 312 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm29256-201ENSMUST00000189094 312 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm28484-201ENSMUST00000190606 312 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm29389-201ENSMUST00000191562 352 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm37979-201ENSMUST00000193065 712 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm43043-201ENSMUST00000196579 412 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm43224-201ENSMUST00000201567 898 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm18598-201ENSMUST00000207724 597 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm45162-201ENSMUST00000209013 618 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm21007-201ENSMUST00000221024 326 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm25799-201ENSMUST00000082643 107 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.06□□□□□ -1.92
Trem1Q9JKE2 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Mir878-201ENSMUST00000104680 78 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm13329-201ENSMUST00000117063 265 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm13731-201ENSMUST00000117332 196 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm11456-201ENSMUST00000121070 256 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm12881-201ENSMUST00000121191 203 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm13210-201ENSMUST00000121483 273 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm15065-201ENSMUST00000121699 273 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm26349-201ENSMUST00000157530 130 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm22764-201ENSMUST00000158370 92 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms