Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm14987-201ENSMUST00000117820 676 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm13502-201ENSMUST00000121574 684 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm26477-201ENSMUST00000122617 323 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm29524-201ENSMUST00000190819 699 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm18433-202ENSMUST00000195682 196 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm30534-201ENSMUST00000217928 207 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.3□□□□□ -1.88
Scn5aQ9JJV9 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm12793-201ENSMUST00000119268 292 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm13155-201ENSMUST00000119277 646 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm7421-201ENSMUST00000119298 639 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm7365-201ENSMUST00000120877 639 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm6373-201ENSMUST00000121026 360 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm12313-201ENSMUST00000121347 421 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm8178-201ENSMUST00000121570 646 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm14589-201ENSMUST00000121640 727 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm11471-201ENSMUST00000121824 198 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm14905-201ENSMUST00000122351 639 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm22187-201ENSMUST00000157819 129 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm26214-201ENSMUST00000158581 107 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm9541-201ENSMUST00000188409 502 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm44349-201ENSMUST00000197048 123 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm44088-201ENSMUST00000204595 237 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm22575-201ENSMUST00000082981 110 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm11387-201ENSMUST00000120266 772 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm14363-201ENSMUST00000122304 409 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm26866-201ENSMUST00000180414 802 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm27315-201ENSMUST00000183977 154 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm38214-201ENSMUST00000192581 988 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm37993-201ENSMUST00000195301 988 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm44223-201ENSMUST00000204854 114 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm44966-201ENSMUST00000208096 157 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn5aQ9JJV9 Gm13687-201ENSMUST00000119857 282 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm23819-201ENSMUST00000158744 109 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Mir3103-201ENSMUST00000175474 67 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm29013-201ENSMUST00000187431 237 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm44526-201ENSMUST00000204664 121 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm23975-201ENSMUST00000082685 106 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Scn5aQ9JJV9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Gm29534-201ENSMUST00000187328 382 ntBASIC3.27□□□□□ -1.89
Scn5aQ9JJV9 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms