Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm45316-201ENSMUST00000210128 162 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm18644-201ENSMUST00000211458 815 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Mir101b-201ENSMUST00000083622 97 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm10161-201ENSMUST00000091506 204 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.9□□□□□ -1.79
Smc1aQ9CU62 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Mir673-201ENSMUST00000102361 91 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm23532-201ENSMUST00000104569 112 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm12383-201ENSMUST00000120628 760 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm25341-201ENSMUST00000157461 268 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm25066-201ENSMUST00000158145 123 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm25369-201ENSMUST00000158848 132 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm19203-201ENSMUST00000174049 939 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm43415-201ENSMUST00000201934 750 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm45814-201ENSMUST00000212646 775 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Smc1aQ9CU62 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm14825-201ENSMUST00000113538 701 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm15387-201ENSMUST00000120421 648 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm11233-201ENSMUST00000122357 634 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm22890-201ENSMUST00000158642 144 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm17655-201ENSMUST00000167969 255 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm17063-201ENSMUST00000168135 456 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm20399-201ENSMUST00000174652 132 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm18727-201ENSMUST00000185981 553 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm42976-201ENSMUST00000200313 222 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm42926-201ENSMUST00000200496 697 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm44076-201ENSMUST00000203072 520 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm23102-201ENSMUST00000083724 116 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm25004-201ENSMUST00000083811 161 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Gm5518-201ENSMUST00000084171 648 ntBASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Smc1aQ9CU62 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm23609-201ENSMUST00000104542 127 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm13379-201ENSMUST00000118053 621 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm2288-201ENSMUST00000118560 638 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm11446-201ENSMUST00000121319 866 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm24059-201ENSMUST00000157493 312 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm25860-201ENSMUST00000158252 126 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm15946-201ENSMUST00000160654 423 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm24111-201ENSMUST00000175491 97 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Mir6401-201ENSMUST00000184499 109 ntBASIC3.87□□□□□ -1.79
Smc1aQ9CU62 Gm3454-201ENSMUST00000185571 412 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms