Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm44274-201ENSMUST00000203417 256 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm44404-201ENSMUST00000203979 636 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm18039-201ENSMUST00000217816 728 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Use1Q9CQ56 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Use1Q9CQ56 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Mir667-201ENSMUST00000102441 92 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm23431-201ENSMUST00000104006 107 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm15399-201ENSMUST00000118055 724 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm13873-201ENSMUST00000119208 427 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm15142-201ENSMUST00000121013 856 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm13676-201ENSMUST00000122185 591 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm19203-201ENSMUST00000174049 939 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm4479-201ENSMUST00000178807 171 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm43954-201ENSMUST00000204634 544 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm18585-201ENSMUST00000215197 556 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Gm7119-201ENSMUST00000221345 695 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.09□□□□□ -1.91
Use1Q9CQ56 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Use1Q9CQ56 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Use1Q9CQ56 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.09□□□□□ -1.92
Use1Q9CQ56 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Use1Q9CQ56 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Use1Q9CQ56 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm26423-201ENSMUST00000104277 128 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Mir1198-201ENSMUST00000116995 121 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm15037-201ENSMUST00000120358 259 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm14581-201ENSMUST00000121726 198 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm24060-201ENSMUST00000157494 95 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm22532-201ENSMUST00000158822 140 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm26362-201ENSMUST00000158865 315 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm22910-201ENSMUST00000178568 132 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm28002-201ENSMUST00000184832 100 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm6510-201ENSMUST00000195916 574 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm7751-201ENSMUST00000212868 709 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm8942-201ENSMUST00000217892 400 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Use1Q9CQ56 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Use1Q9CQ56 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Use1Q9CQ56 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Use1Q9CQ56 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.07□□□□□ -1.92
Use1Q9CQ56 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Use1Q9CQ56 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Use1Q9CQ56 Gm24671-201ENSMUST00000104159 158 ntBASIC3.07□□□□□ -1.92
Use1Q9CQ56 Gm12492-201ENSMUST00000117665 564 ntBASIC3.07□□□□□ -1.92
Use1Q9CQ56 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Use1Q9CQ56 Gm25058-201ENSMUST00000157365 128 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms