Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdhgb4Q91XX6 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Pcdhgb4Q91XX6 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Pcdhgb4Q91XX6 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.02□□□□□ -1.45
Pcdhgb4Q91XX6 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.02□□□□□ -1.45
Pcdhgb4Q91XX6 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.02□□□□□ -1.45
Pcdhgb4Q91XX6 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm36989-201ENSMUST00000193225 2160 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm20486-201ENSMUST00000101544 128 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Mir687-201ENSMUST00000102166 89 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm26144-201ENSMUST00000104475 132 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm14977-201ENSMUST00000121626 812 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm22867-201ENSMUST00000157499 109 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm16102-201ENSMUST00000160955 420 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm8214-201ENSMUST00000172123 351 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm25935-201ENSMUST00000178746 107 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Mir6540-201ENSMUST00000184886 108 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm28883-201ENSMUST00000189256 369 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm8319-201ENSMUST00000205708 641 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 CT010449.1-201ENSMUST00000220624 153 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Pcdhgb4Q91XX6 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm11561-201ENSMUST00000117429 417 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm12850-201ENSMUST00000119210 436 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm13581-201ENSMUST00000120675 278 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm23312-201ENSMUST00000158774 102 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm20534-201ENSMUST00000172957 172 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm22655-201ENSMUST00000174949 96 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Mirt2-201ENSMUST00000175179 285 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm5558-201ENSMUST00000178933 495 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm28552-201ENSMUST00000190725 388 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm37617-201ENSMUST00000194309 159 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm44360-201ENSMUST00000200081 82 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm42643-201ENSMUST00000200504 279 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm43105-201ENSMUST00000202987 459 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm7990-201ENSMUST00000212126 593 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 AC168056.2-201ENSMUST00000223591 269 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 AC239878.1-201ENSMUST00000224212 506 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 AC161383.1-201ENSMUST00000227356 527 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm5612-201ENSMUST00000053326 375 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm6065-201ENSMUST00000081336 492 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Gm43361-201ENSMUST00000196562 4690 ntBASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6□□□□□ -1.45
Pcdhgb4Q91XX6 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Pcdhgb4Q91XX6 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms