Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm22177-201ENSMUST00000175002 158 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm20612-201ENSMUST00000176318 236 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm11392-201ENSMUST00000181419 710 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm27387-201ENSMUST00000184583 116 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm28802-201ENSMUST00000188624 944 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm29525-201ENSMUST00000189844 699 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm44050-201ENSMUST00000204263 527 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm5001-201ENSMUST00000204361 331 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm9375-201ENSMUST00000208899 903 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc9Q8VC31 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm14981-201ENSMUST00000117325 943 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm13831-201ENSMUST00000118764 302 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm23852-201ENSMUST00000158376 77 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Igkv17-134-201ENSMUST00000168310 348 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Snord92-201ENSMUST00000175548 85 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm37946-201ENSMUST00000192064 347 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm19620-201ENSMUST00000195972 434 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm5552-201ENSMUST00000197149 515 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm44259-201ENSMUST00000204996 298 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm18225-201ENSMUST00000216708 742 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 LOC667541-201ENSMUST00000223408 278 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ccdc9Q8VC31 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm12520-201ENSMUST00000117493 316 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Snrpert-201ENSMUST00000121967 279 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Mup-ps4-201ENSMUST00000151005 539 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm22726-201ENSMUST00000158089 179 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Mir6951-201ENSMUST00000183910 75 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm28997-201ENSMUST00000188759 429 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm38046-201ENSMUST00000192733 550 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm18971-201ENSMUST00000197240 374 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm29809-201ENSMUST00000218423 493 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm9628-201ENSMUST00000222169 725 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Gm23104-201ENSMUST00000083722 104 ntBASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc9Q8VC31 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms