Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm23939-201ENSMUST00000082880 133 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Mir383-201ENSMUST00000083523 70 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Ushbp1Q8R370 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
Ushbp1Q8R370 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ushbp1Q8R370 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm14415-201ENSMUST00000118260 1578 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm23691-201ENSMUST00000101878 107 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Mir883a-201ENSMUST00000104824 76 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm14107-201ENSMUST00000117774 330 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm14861-201ENSMUST00000119451 455 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm12495-201ENSMUST00000119750 447 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm11931-201ENSMUST00000121630 447 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm14530-201ENSMUST00000122391 333 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm23228-201ENSMUST00000157296 270 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm25386-201ENSMUST00000157814 288 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm24730-201ENSMUST00000158228 117 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm27233-201ENSMUST00000184030 307 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Mir7062-201ENSMUST00000185038 66 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm19777-201ENSMUST00000191940 358 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Trbv11-201ENSMUST00000194354 260 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm5034-201ENSMUST00000199115 634 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm17906-201ENSMUST00000202480 901 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm5876-201ENSMUST00000203735 243 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm44946-201ENSMUST00000208425 572 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm7380-201ENSMUST00000211599 466 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm22423-201ENSMUST00000082861 184 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm23733-201ENSMUST00000083750 106 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ushbp1Q8R370 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.83□□□□□ -1.64
Ushbp1Q8R370 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm11398-201ENSMUST00000120330 320 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm23743-201ENSMUST00000157389 274 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm20773-201ENSMUST00000178940 681 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm23648-201ENSMUST00000180301 107 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm29216-201ENSMUST00000187117 492 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm20811-201ENSMUST00000190500 553 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm37119-201ENSMUST00000195691 389 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm43440-201ENSMUST00000201957 729 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm18194-201ENSMUST00000210455 481 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm2628-201ENSMUST00000218019 426 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm19441-201ENSMUST00000221545 330 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm24623-201ENSMUST00000082616 194 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm23506-201ENSMUST00000083077 107 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Olfr203-201ENSMUST00000089305 924 ntBASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.82□□□□□ -1.64
Ushbp1Q8R370 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ushbp1Q8R370 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms