Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm5379-201ENSMUST00000120973 826 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm14845-201ENSMUST00000121259 306 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm11692-201ENSMUST00000122121 902 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm25104-201ENSMUST00000122476 163 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm22755-201ENSMUST00000157143 100 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm23591-201ENSMUST00000157663 286 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm21758-201ENSMUST00000179336 819 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm23816-201ENSMUST00000179617 132 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm27899-201ENSMUST00000184715 64 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm8296-201ENSMUST00000185597 524 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm28474-201ENSMUST00000188501 315 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm29647-201ENSMUST00000188795 666 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm28337-201ENSMUST00000190425 666 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm28504-201ENSMUST00000190977 666 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm31511-201ENSMUST00000193134 657 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm18900-201ENSMUST00000193218 584 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm35843-201ENSMUST00000193716 666 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm37495-201ENSMUST00000194590 264 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm44910-201ENSMUST00000208451 396 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm34783-201ENSMUST00000209159 303 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 CT025526.1-201ENSMUST00000217327 267 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm22810-201ENSMUST00000082741 158 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm22287-201ENSMUST00000083197 107 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Mir323-201ENSMUST00000083683 86 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Vps53Q8CCB4 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm13478-201ENSMUST00000118312 413 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm12252-201ENSMUST00000119517 219 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm14411-201ENSMUST00000121798 914 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm22960-201ENSMUST00000122517 104 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm25908-201ENSMUST00000157624 98 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm23782-201ENSMUST00000157939 120 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm26159-201ENSMUST00000158968 104 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm27957-201ENSMUST00000184054 127 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm6501-201ENSMUST00000187178 916 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm20832-201ENSMUST00000189076 665 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm38234-201ENSMUST00000195204 421 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm30638-201ENSMUST00000195570 656 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm36728-201ENSMUST00000195782 665 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Igkv12-49-201ENSMUST00000197714 278 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm18644-201ENSMUST00000211458 815 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm7495-201ENSMUST00000215099 426 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm35262-201ENSMUST00000215133 267 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm9762-201ENSMUST00000036976 444 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm26449-201ENSMUST00000082452 104 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm22265-201ENSMUST00000082947 116 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.75□□□□□ -1.65
Vps53Q8CCB4 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm24788-201ENSMUST00000104283 156 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm12173-201ENSMUST00000117622 273 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm7429-201ENSMUST00000118664 348 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm12891-201ENSMUST00000119358 240 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm12564-201ENSMUST00000119860 321 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm15799-201ENSMUST00000120899 289 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm16274-201ENSMUST00000139251 592 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm23585-201ENSMUST00000157656 102 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm26028-201ENSMUST00000158660 294 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm24315-201ENSMUST00000177835 127 ntBASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps53Q8CCB4 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms