Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm45654-201ENSMUST00000210980 123 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 AC171206.1-201ENSMUST00000213612 213 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm16017-201ENSMUST00000119834 208 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm16355-201ENSMUST00000128606 231 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm17072-201ENSMUST00000166673 658 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm28639-201ENSMUST00000191519 481 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm38356-201ENSMUST00000194313 408 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm44092-201ENSMUST00000204470 258 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 AC118006.1-201ENSMUST00000224211 501 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col6a6Q8C6K9 Gm7195-201ENSMUST00000190869 1707 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm26387-201ENSMUST00000104238 132 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm14890-201ENSMUST00000117660 676 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm15733-201ENSMUST00000132957 242 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm17091-201ENSMUST00000163248 357 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm42828-201ENSMUST00000199669 469 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm20074-201ENSMUST00000208144 484 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm14385-201ENSMUST00000116315 876 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm14527-201ENSMUST00000179300 639 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm28596-201ENSMUST00000185870 696 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm29525-201ENSMUST00000189844 699 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm29523-201ENSMUST00000191415 699 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm32295-201ENSMUST00000192558 696 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm31260-201ENSMUST00000193478 696 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm45382-201ENSMUST00000210607 151 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Gm6796-201ENSMUST00000211919 243 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.29□□□□□ -2.04
Col6a6Q8C6K9 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Gm14977-201ENSMUST00000121626 812 ntBASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Gm6374-201ENSMUST00000159051 788 ntBASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col6a6Q8C6K9 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Gm25820-201ENSMUST00000198589 127 ntBASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Gm17893-201ENSMUST00000203017 770 ntBASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Gm18704-201ENSMUST00000219736 446 ntBASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
Col6a6Q8C6K9 Gm14912-201ENSMUST00000120166 1773 ntBASIC2.27□□□□□ -2.05
Col6a6Q8C6K9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col6a6Q8C6K9 Gm14988-201ENSMUST00000117224 1548 ntBASIC2.27□□□□□ -2.05
Col6a6Q8C6K9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Col6a6Q8C6K9 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms