Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23725-201ENSMUST00000177876 107 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm25235-201ENSMUST00000179933 107 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm5368-201ENSMUST00000189012 589 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm34176-201ENSMUST00000192621 474 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm6059-201ENSMUST00000196903 340 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm42458-201ENSMUST00000201914 369 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm45422-201ENSMUST00000211476 246 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm25207-201ENSMUST00000093745 107 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm43663-201ENSMUST00000198643 1505 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm14825-201ENSMUST00000113538 701 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm7657-201ENSMUST00000118851 666 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm13077-201ENSMUST00000121941 484 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm12956-201ENSMUST00000122184 414 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm22814-201ENSMUST00000157452 104 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm26312-201ENSMUST00000157769 165 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Mir3112-201ENSMUST00000175431 82 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm21827-201ENSMUST00000178247 423 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Mir6336-201ENSMUST00000183581 130 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm21673-201ENSMUST00000186640 436 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm6075-201ENSMUST00000186816 486 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm21135-201ENSMUST00000189023 436 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm5285-201ENSMUST00000193089 666 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm44016-201ENSMUST00000203463 164 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Trim47Q8C0E3 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm23274-201ENSMUST00000104056 130 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm24235-201ENSMUST00000104319 129 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm15807-201ENSMUST00000119880 1128 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm6374-201ENSMUST00000159051 788 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm24106-201ENSMUST00000175498 127 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm27781-201ENSMUST00000185185 92 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm44817-201ENSMUST00000205416 453 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm44776-201ENSMUST00000207212 381 ntBASIC5.8□□□□□ -1.48
Trim47Q8C0E3 Gm6112-201ENSMUST00000208037 629 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms