Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm25667-201ENSMUST00000157701 275 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm16563-201ENSMUST00000162673 423 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm20612-201ENSMUST00000176318 236 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm6501-201ENSMUST00000187178 916 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm6510-201ENSMUST00000195916 574 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm44927-201ENSMUST00000207573 716 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm45380-201ENSMUST00000210465 315 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm45420-201ENSMUST00000211243 425 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm9309-201ENSMUST00000223537 546 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm22739-201ENSMUST00000083437 160 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Mir101b-201ENSMUST00000083622 97 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.08□□□□□ -1.92
Clrn3Q8BHH8 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm15126-201ENSMUST00000118631 833 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm11881-201ENSMUST00000119408 572 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm12105-201ENSMUST00000120846 779 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm22561-201ENSMUST00000157331 84 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm23312-201ENSMUST00000158774 102 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm24819-201ENSMUST00000175094 166 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm24520-201ENSMUST00000179510 110 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm18340-201ENSMUST00000196342 609 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm10237-201ENSMUST00000078393 273 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Clrn3Q8BHH8 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm26143-201ENSMUST00000104480 108 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm9009-201ENSMUST00000117321 326 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm12458-201ENSMUST00000119387 495 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm14008-201ENSMUST00000120483 274 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm7350-201ENSMUST00000120964 636 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm14253-201ENSMUST00000122112 639 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm26100-201ENSMUST00000157245 127 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm24008-201ENSMUST00000157733 138 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm25835-201ENSMUST00000158917 144 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm22910-201ENSMUST00000178568 132 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm25198-201ENSMUST00000178574 110 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm25944-201ENSMUST00000178758 94 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm37098-201ENSMUST00000192290 244 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm43899-201ENSMUST00000203675 246 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.06□□□□□ -1.92
Clrn3Q8BHH8 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Clrn3Q8BHH8 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms