Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Mir6363-201ENSMUST00000184880 114 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm28629-201ENSMUST00000187309 263 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm43828-201ENSMUST00000196890 639 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm5955-201ENSMUST00000222712 219 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm25579-201ENSMUST00000083407 106 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.48□□□□□ -1.53
Trim56Q80VI1 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Trim56Q80VI1 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm22498-201ENSMUST00000104497 86 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm12149-201ENSMUST00000117511 654 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm14878-201ENSMUST00000118167 293 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm14359-201ENSMUST00000118883 424 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm25534-201ENSMUST00000175365 125 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm23793-201ENSMUST00000179396 117 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm29196-201ENSMUST00000189239 618 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm28951-201ENSMUST00000190742 313 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm43355-201ENSMUST00000196541 346 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gm10038-201ENSMUST00000077233 441 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.47□□□□□ -1.53
Trim56Q80VI1 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Trim56Q80VI1 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Trim56Q80VI1 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.46□□□□□ -1.53
Trim56Q80VI1 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Trim56Q80VI1 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trim56Q80VI1 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Trim56Q80VI1 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm22272-201ENSMUST00000104039 134 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm12328-201ENSMUST00000118611 197 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm7312-201ENSMUST00000118798 469 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm22601-201ENSMUST00000157595 250 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm25665-201ENSMUST00000157695 110 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm16114-201ENSMUST00000161930 300 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm15796-201ENSMUST00000162135 204 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm23141-201ENSMUST00000178682 94 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm11395-201ENSMUST00000181011 499 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm11394-201ENSMUST00000181421 517 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm28872-201ENSMUST00000191518 158 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm44757-201ENSMUST00000206373 157 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm18442-201ENSMUST00000220925 639 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm6988-201ENSMUST00000222676 375 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.46□□□□□ -1.54
Trim56Q80VI1 Gm6043-201ENSMUST00000099961 492 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms