Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.68□□□□□ -1.66
Ddx58Q6Q899 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx58Q6Q899 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Ddx58Q6Q899 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx58Q6Q899 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.68□□□□□ -1.66
Ddx58Q6Q899 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm24951-201ENSMUST00000102182 109 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Mir1193-201ENSMUST00000116761 121 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm12102-201ENSMUST00000118251 604 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm14358-201ENSMUST00000118458 403 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm14901-201ENSMUST00000119001 283 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm12458-201ENSMUST00000119387 495 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm11704-201ENSMUST00000120031 214 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm15014-201ENSMUST00000120742 258 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm24380-201ENSMUST00000122696 324 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm23753-201ENSMUST00000157575 149 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm3454-201ENSMUST00000185571 412 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm19637-201ENSMUST00000185933 579 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm5368-201ENSMUST00000189012 589 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm43043-201ENSMUST00000196579 412 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm42828-201ENSMUST00000199669 469 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm45006-201ENSMUST00000206078 690 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm8249-201ENSMUST00000219225 465 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm8274-201ENSMUST00000219820 463 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 AC183092.2-201ENSMUST00000225542 1153 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm25205-201ENSMUST00000082841 103 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx58Q6Q899 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm24120-201ENSMUST00000103978 129 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm15025-201ENSMUST00000118434 418 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm14541-201ENSMUST00000118985 157 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm24976-201ENSMUST00000158972 135 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm25873-201ENSMUST00000180317 107 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm28500-201ENSMUST00000190286 151 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm36934-201ENSMUST00000192007 306 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm43407-201ENSMUST00000199816 317 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm8774-201ENSMUST00000203621 692 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm29754-201ENSMUST00000206269 358 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm19219-201ENSMUST00000215863 724 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.66□□□□□ -1.66
Ddx58Q6Q899 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
Ddx58Q6Q899 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Ddx58Q6Q899 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.65□□□□□ -1.66
Ddx58Q6Q899 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ddx58Q6Q899 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ddx58Q6Q899 Gm13664-201ENSMUST00000117304 345 ntBASIC4.65□□□□□ -1.67
Ddx58Q6Q899 Gm15799-201ENSMUST00000120899 289 ntBASIC4.65□□□□□ -1.67
Ddx58Q6Q899 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.65□□□□□ -1.67
Ddx58Q6Q899 Gm14564-201ENSMUST00000122159 294 ntBASIC4.65□□□□□ -1.67
Ddx58Q6Q899 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 161.8 ms