Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm28861-201ENSMUST00000189681 315 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29180-201ENSMUST00000190003 315 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm28939-201ENSMUST00000190351 315 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm28223-201ENSMUST00000190469 315 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29575-201ENSMUST00000190597 315 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29092-201ENSMUST00000190768 315 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29469-201ENSMUST00000191448 315 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm42570-201ENSMUST00000195937 292 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm45434-201ENSMUST00000210550 293 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm25482-201ENSMUST00000083225 107 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sh3rf1Q69ZI1 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm26376-201ENSMUST00000104784 110 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm12704-201ENSMUST00000119789 464 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm13345-201ENSMUST00000121928 228 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm26404-201ENSMUST00000158498 109 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm7953-201ENSMUST00000168278 469 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm25534-201ENSMUST00000175365 125 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm9830-201ENSMUST00000178509 357 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm22259-201ENSMUST00000178926 107 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm9443-201ENSMUST00000188406 816 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm17775-201ENSMUST00000198542 258 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm31931-201ENSMUST00000219666 222 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 mt-Ti-201ENSMUST00000082393 69 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm24706-201ENSMUST00000082806 137 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Mir20a-201ENSMUST00000083508 107 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Mir27a-201ENSMUST00000083510 87 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Sh3rf1Q69ZI1 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm22266-201ENSMUST00000104011 138 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm13172-201ENSMUST00000118685 256 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm14915-201ENSMUST00000120747 204 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm24780-201ENSMUST00000157635 143 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm26490-201ENSMUST00000157879 140 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Mir3964-201ENSMUST00000174898 74 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm10784-201ENSMUST00000178715 238 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm22263-201ENSMUST00000180060 104 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm29192-201ENSMUST00000190942 377 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm38183-201ENSMUST00000193189 205 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Mir409-201ENSMUST00000198153 79 ntBASIC5.06□□□□□ -1.6
Sh3rf1Q69ZI1 Gm42579-201ENSMUST00000200512 734 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms